PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

C.cajan_23913

Common Name

KK1_024711

Organism

Cajanus cajan

Taxonomic ID

3821

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus

Family

bZIP

Protein Properties

Length: 318aa MW: 36601.7 Da PI: 6.1935

Description

bZIP family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
C.cajan_23913	genome	IIPG	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	bZIP_1	33.5	9.1e-11	185	228	5	48
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkke 48 kr +r NR +A+rsR RK+++i eLe+ v +L+ae + L + C.cajan_23913 185 KRVKRILANRQSAQRSRVRKLQYISELERSVTSLQAEVSVLSPR 228 899*********************************98877655 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SMART	SM00338	3.8E-14	181	245	IPR004827	Basic-leucine zipper domain
Pfam	PF07716	2.5E-9	182	230	IPR004827	Basic-leucine zipper domain
PROSITE profile	PS50217	9.622	183	235	IPR004827	Basic-leucine zipper domain
Gene3D	G3DSA:1.20.5.170	6.0E-13	185	236	No hit	No description
SuperFamily	SSF57959	4.18E-11	185	239	No hit	No description
CDD	cd14703	6.69E-23	186	236	No hit	No description
PROSITE pattern	PS00036	0	188	203	IPR004827	Basic-leucine zipper domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0006355	Biological Process	regulation of transcription, DNA-templated
GO:0003700	Molecular Function	transcription factor activity, sequence-specific DNA binding
GO:0043565	Molecular Function	sequence-specific DNA binding

Sequence ? help Back to Top
Protein Sequence Length: 318 aa Download sequence Send to blast
MAQLPPKIPN MSPSWPDLKM PLPPPLNTTN YHQHNNQNPS WVDEFLDFSS ARRGAHRRSV 60 SDSIMDSPVK CHDDNNNENA FDKFDDEQLM SMFSDEVELS GVPMPPPTTL SSSNPSSPSD 120 QNFFYDEKES NHQKKVQEEE EKHHHHHYQF KSEADEVESQ CKQENMQPPN DTNTCSSNER 180 ITDPKRVKRI LANRQSAQRS RVRKLQYISE LERSVTSLQA EVSVLSPRVA FLDHQRLLLN 240 VDNSALKQRI AALAQDKIFK DAHQEALKRE IERLRRVYHQ QNLTKMENAA GSPLPSPSPK 300 PICDVQTEKE VQILNFED

Functional Description ? help Back to Top
Source	Description
UniProt	Transcriptional activator. {ECO:0000269\|PubMed:17719007}.

Cis-element ? help Back to Top
Source	Link
PlantRegMap	C.cajan_23913

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Nucleotide ? help Back to Top
Source	Hit ID	E-value	Description
GenBank	BT096900	0.0	BT096900.1 Soybean clone JCVI-FLGm-25J24 unknown mRNA.

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_020229493.1	0.0	basic leucine zipper 34
Swissprot	Q9M2K4	1e-105	BZP61_ARATH; Basic leucine zipper 61
TrEMBL	A0A151SER7	0.0	A0A151SER7_CAJCA; Transcription factor RF2b
STRING	GLYMA12G33600.1	1e-168	(Glycine max)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Fabids	OGEF2011	34	88

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT3G58120.1	1e-98	bZIP family protein

Publications ? help Back to Top
Ding Y, et al. Four distinct types of dehydration stress memory genes in Arabidopsis thaliana. BMC Plant Biol., 2013. 13: p. 229 [PMID:24377444] Gibalová A, et al. Characterization of pollen-expressed bZIP protein interactions and the role of ATbZIP18 in the male gametophyte. Plant Reprod, 2017. 30(1): p. 1-17 [PMID:27896439] Ezer D, et al. The G-Box Transcriptional Regulatory Code in Arabidopsis. Plant Physiol., 2017. 175(2): p. 628-640 [PMID:28864470]