PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_23649
Common NameKK1_024336
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family WRKY
Protein Properties Length: 322aa    MW: 35792.9 Da    PI: 6.1764
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_23649genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY93.91.2e-29162222259
                    --SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
           WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                    +Dg++WrKYGqKe+ gs++prsYYrCt++   +C++kk+v+r +++p+++e+tY+g+H+++
  C.cajan_23649 162 EDGFTWRKYGQKEILGSKYPRSYYRCTHQklyECQAKKQVQRLDDNPNIFEVTYRGKHTCH 222
                    7****************************9999**************************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.802.0E-28156223IPR003657WRKY domain
SuperFamilySSF1182904.58E-26158223IPR003657WRKY domain
SMARTSM007741.0E-38161223IPR003657WRKY domain
PROSITE profilePS5081120.702162224IPR003657WRKY domain
PfamPF031067.8E-27162222IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 322 aa     Download sequence    Send to blast
MEEVINSIRR ASMLAQNLEQ NLPNLANQPT MMSLSIDEIT EAFTAAKQKL LLISRQNQTS  60
EYETQRPQEM DATLMHEWLR SSHALTMDQL FQVHAARSTL QIGEMGGRDG EDSEKTMVSE  120
GEVQGIVASS SRSRKRSKDA NQEKEKIMVP APQFGNTEMP PEDGFTWRKY GQKEILGSKY  180
PRSYYRCTHQ KLYECQAKKQ VQRLDDNPNI FEVTYRGKHT CHMSSTAPSS SSSLPLQQLL  240
VDMTHNSNTI SSQLSPRMNY LSLQTGGAAA TSSGSGGAST SRYGGDYPVV DMADAMFNSG  300
SSSGNNSMEF LFSPAEDKKD PN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A3e-19162221968OsWRKY45
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00304DAPTransfer from AT2G40740Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_23649
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020229001.20.0WRKY transcription factor 55
TrEMBLA0A151SG080.0A0A151SG08_CAJCA; WRKY transcription factor 55
STRINGGLYMA04G40121.11e-165(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF86293142
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40740.12e-47WRKY DNA-binding protein 55