PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_22504
Common NameKK1_023166
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family MYB
Protein Properties Length: 264aa    MW: 30696.4 Da    PI: 8.6271
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_22504genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding59.38.5e-192269148
                     TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding  1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48
                     +g+WT+eEd ll+++v+++G g+W+++a   g++R +k+c++rw +yl
    C.cajan_22504 22 KGPWTAEEDRLLIQYVRLHGEGRWNSVATLAGLKRNGKSCRLRWVNYL 69
                     79********************************************97 PP
2Myb_DNA-binding49.88.2e-1675119147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +g  T++E+ ++ ++++++G++ W+tIar ++ gRt++++k++w+++
    C.cajan_22504  75 KGQITPQEESIIQELHARWGNR-WSTIARSLP-GRTDNEIKNYWRTH 119
                      5778******************.*********.************97 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129425.2551773IPR017930Myb domain
SuperFamilySSF466897.26E-3020116IPR009057Homeodomain-like
SMARTSM007171.3E-162171IPR001005SANT/Myb domain
PfamPF002498.1E-182269IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.606.7E-242375IPR009057Homeodomain-like
CDDcd001677.18E-122469No hitNo description
PROSITE profilePS5129418.9474124IPR017930Myb domain
SMARTSM007173.8E-1474122IPR001005SANT/Myb domain
PfamPF002491.1E-1375119IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.604.1E-2476123IPR009057Homeodomain-like
CDDcd001671.61E-979120No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 264 aa     Download sequence    Send to blast
MYWGVMAGNM GWGVIEEESW RKGPWTAEED RLLIQYVRLH GEGRWNSVAT LAGLKRNGKS  60
CRLRWVNYLR PDLKKGQITP QEESIIQELH ARWGNRWSTI ARSLPGRTDN EIKNYWRTHF  120
KKKAKSPSDA GEKAKIRSSR KQQFQQQQLQ LKQQQVQQQQ QVQFNFDMKG IINLLEENDH  180
RVPSISQETQ EMVNMYPNTT SEQQGYLNSM FNVVNYNNVS APESSDEEIF WDDGLWNLDD  240
VLFNFNAASA TSKASLYNLA APFC
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1h8a_C4e-272212427128MYB TRANSFORMING PROTEIN
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_22504
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankKP9661000.0KP966100.1 Lablab purpureus R2R3-MYB factor (MYB) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020222858.10.0myb-related protein 305
TrEMBLA0A151T1210.0A0A151T121_CAJCA; Transcription factor MYB21
STRINGXP_007144143.11e-150(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF118234108
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G24310.12e-78myb domain protein 305