PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_18734
Common NameKK1_019281
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family NAC
Protein Properties Length: 357aa    MW: 40521.7 Da    PI: 6.7264
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_18734genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM171.23.2e-53191451129
            NAM   1 lppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlskk 96 
                    lp GfrFhPtdeel+++yL+kkv ++ + +  +i evd++k+ePwdLp  +k +e+ewy+F+ rd+ky+tg r+nrat++gyWkatgkdke++  +
  C.cajan_18734  19 LPLGFRFHPTDEELINHYLTKKVVDNCFCA-LAIGEVDLNKCEPWDLPGLAKMGETEWYYFCVRDRKYPTGLRTNRATDAGYWKATGKDKEIIM-Q 112
                    699***********************9888.67***************8888899***************************************.9 PP

            NAM  97 gelvglkktLvfykgrapkgektdWvmheyrle 129
                    ++l+g+kktLvfykgrapkgekt+W++heyrle
  C.cajan_18734 113 NALIGMKKTLVFYKGRAPKGEKTNWIIHEYRLE 145
                    99*****************************85 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019413.92E-6216166IPR003441NAC domain
PROSITE profilePS5100557.44219166IPR003441NAC domain
PfamPF023654.7E-2720144IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 357 aa     Download sequence    Send to blast
VGSMENVSKP KKENQQFELP LGFRFHPTDE ELINHYLTKK VVDNCFCALA IGEVDLNKCE  60
PWDLPGLAKM GETEWYYFCV RDRKYPTGLR TNRATDAGYW KATGKDKEII MQNALIGMKK  120
TLVFYKGRAP KGEKTNWIIH EYRLEGKHNQ LKPGKSEWVI CRVFEKSHRG KKMHVPKCGR  180
FKLNSFGVEP SSHASQLPPL MDSSPYNSET RATAGELSQL TCFSDQNTHD DIVESMETPM  240
LDFSPSSRPD GDVSASAKAT LSVSNQSTQI AHQIGNSQCL DYCYVPQEQS MLRMLMENRG  300
SSAMQFQKTE FSEGRDFDAD TSFVIYNNND MIHNMFGNQD HSSASIGPVD TNCLWNY
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1ut4_A2e-511617214171NO APICAL MERISTEM PROTEIN
1ut4_B2e-511617214171NO APICAL MERISTEM PROTEIN
1ut7_A2e-511617214171NO APICAL MERISTEM PROTEIN
1ut7_B2e-511617214171NO APICAL MERISTEM PROTEIN
3swm_A2e-511617217174NAC domain-containing protein 19
3swm_B2e-511617217174NAC domain-containing protein 19
3swm_C2e-511617217174NAC domain-containing protein 19
3swm_D2e-511617217174NAC domain-containing protein 19
3swp_A2e-511617217174NAC domain-containing protein 19
3swp_B2e-511617217174NAC domain-containing protein 19
3swp_C2e-511617217174NAC domain-containing protein 19
3swp_D2e-511617217174NAC domain-containing protein 19
4dul_A2e-511617214171NAC domain-containing protein 19
4dul_B2e-511617214171NAC domain-containing protein 19
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_18734
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJX3923990.0JX392399.1 Glycine max NAC domain protein (NLP2) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020219833.10.0NAC domain-containing protein 100
TrEMBLA0A151TCA60.0A0A151TCA6_CAJCA; Protein CUP-SHAPED COTYLEDON 2 (Fragment)
STRINGGLYMA09G37050.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF40934171
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G61430.11e-107NAC domain containing protein 100