PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_17832
Common NameKK1_018358
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family GATA
Protein Properties Length: 275aa    MW: 30820.9 Da    PI: 7.3592
Description GATA family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_17832genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1GATA53.82.6e-17201235135
           GATA   1 CsnCgttkTplWRrgpdgnktLCnaCGlyyrkkgl 35 
                    C++C +  Tp+WR gp g+ktLCnaCG++y++ +l
  C.cajan_17832 201 CTHCLAQRTPQWRAGPLGPKTLCNACGVRYKSGRL 235
                    *******************************9986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5011411.306195231IPR000679Zinc finger, GATA-type
SMARTSM004015.9E-14195249IPR000679Zinc finger, GATA-type
SuperFamilySSF577161.81E-14197259No hitNo description
Gene3DG3DSA:3.30.50.101.6E-13199233IPR013088Zinc finger, NHR/GATA-type
CDDcd002026.87E-11200247No hitNo description
PfamPF003205.3E-15201235IPR000679Zinc finger, GATA-type
PROSITE patternPS003440201226IPR000679Zinc finger, GATA-type
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0008270Molecular Functionzinc ion binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 275 aa     Download sequence    Send to blast
MNMDMCQNVS VSGECQQEHV LAPSCSSSLD DLFSAQNTEV DVELEWLSVF VEDCFSSPPS  60
CVFVPASVKT TTTSSTNPSG TLKRPQQNDS PLQNFTVPGK ARSKRKRLSA PRTKDPLSMW  120
SHHLNPQNEA LSSDPPLLKQ AYWLADSELM MPKPKEETKE EVVVVEKIVS KERFGESEFE  180
SEFESCNGQQ QQLQQPVARR CTHCLAQRTP QWRAGPLGPK TLCNACGVRY KSGRLLPEYR  240
PAKSPTFVSY LHSNSHKKVM EMRMAVYPSS ISSDM
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_17832
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankBT0935011e-137BT093501.1 Soybean clone JCVI-FLGm-14K19 unknown mRNA.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020219364.10.0GATA transcription factor 5
TrEMBLA0A151T9S40.0A0A151T9S4_CAJCA; GATA transcription factor 11
STRINGXP_007161927.11e-155(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF84872444
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G60530.11e-35GATA transcription factor 4