PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_17676
Common NameKK1_018199
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family ERF
Protein Properties Length: 394aa    MW: 44374.3 Da    PI: 5.4163
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_17676genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP257.63.2e-1865122155
            AP2   1 sgykGVrwdkkrgrWvAeIrdpseng.....krkrfslgkfgtaeeAakaaiaarkkleg 55 
                    ++++GVr++  +g+WvAeIr+p + g     k  r +lg+f ta eAa a+++a+k+++g
  C.cajan_17676  65 CKFRGVRQRI-WGKWVAEIREPIN-GklvgeKANRLWLGTFSTAHEAALAYDEAAKAMYG 122
                    79*****998.**********855.55976666************************998 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
CDDcd000188.47E-3265131No hitNo description
PfamPF008471.6E-1365122IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.103.0E-2866132IPR001471AP2/ERF domain
SMARTSM003805.6E-3666136IPR001471AP2/ERF domain
SuperFamilySSF541711.5E-1866132IPR016177DNA-binding domain
PROSITE profilePS5103221.64166130IPR001471AP2/ERF domain
PRINTSPR003676.0E-96778IPR001471AP2/ERF domain
PRINTSPR003676.0E-996112IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 394 aa     Download sequence    Send to blast
ERKSRKRRSG VSDSVEDTLE KWKEYNRKQQ LGCRENGVEV IHKVPAKGSR KGCMRGKGGP  60
QNSDCKFRGV RQRIWGKWVA EIREPINGKL VGEKANRLWL GTFSTAHEAA LAYDEAAKAM  120
YGPCARLNFP ESNGSSLSSS GCDQKSPTAS EVGDFEEETE EKPCVADESI EELKEMVTTG  180
FEHQTSEECK VMSLSSVVKS QGFGRELEEV VRNLGEEGNQ LQKEPMDIRD DYCSSFDAAE  240
HEILVKSEET RGESVESFRS YSNPRPNSEA CVAKKNTEEV ISEILGLCHS KCLEMTPNEQ  300
YRNGDSNHPS MESMSQVEAL NNINNTNRNS LHGFSSGHSR KLCDLSQQLH KHRNNMQFAE  360
LEVGYDYSFL RPDYDFGLLE EKKLLDVCFP RIGS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1gcc_A4e-1667130360ETHYLENE RESPONSIVE ELEMENT BINDING FACTOR 1
Search in ModeBase
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
138SRKRRS
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_17676
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJX4403881e-155JX440388.1 Glycine max DRE-binding protein 2D;1 (DREB2D;1) mRNA, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020219847.10.0dehydration-responsive element-binding protein 2A
TrEMBLA0A151T9810.0A0A151T981_CAJCA; Dehydration-responsive element-binding protein 2A (Fragment)
STRINGXP_007140202.11e-180(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF132862127
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G38340.13e-33ERF family protein