PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | C.cajan_15159 | ||||||||
Common Name | KK1_015597 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
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Family | C2H2 | ||||||||
Protein Properties | Length: 386aa MW: 42640.8 Da PI: 8.439 | ||||||||
Description | C2H2 family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | zf-C2H2 | 13.3 | 0.00024 | 148 | 171 | 1 | 23 |
EEETTTTEEESSHHHHHHHHHH.T CS zf-C2H2 1 ykCpdCgksFsrksnLkrHirt.H 23 ++C+ Cg+ F +++L++H+ + H C.cajan_15159 148 FPCTACGEIFQKPHLLETHQTLkH 171 89******************9877 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50157 | 9.432 | 148 | 172 | IPR007087 | Zinc finger, C2H2 |
PROSITE pattern | PS00028 | 0 | 150 | 171 | IPR007087 | Zinc finger, C2H2 |
Gene3D | G3DSA:3.90.228.10 | 2.3E-5 | 174 | 290 | IPR012317 | Poly(ADP-ribose) polymerase, catalytic domain |
SuperFamily | SSF56399 | 2.01E-12 | 175 | 385 | No hit | No description |
Gene3D | G3DSA:3.90.228.10 | 1.0E-4 | 321 | 385 | IPR012317 | Poly(ADP-ribose) polymerase, catalytic domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0016021 | Cellular Component | integral component of membrane | ||||
GO:0003950 | Molecular Function | NAD+ ADP-ribosyltransferase activity | ||||
GO:0046872 | Molecular Function | metal ion binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 386 aa Download sequence Send to blast |
MASIATFFNN FFLYLLILLL HLGCFIFTTT TKKDDNHHAP PLKKRKISPL SQPSSPSHPK 60 FKTHKAISSS WHFIKHLFST KSCKNPTTTT ATAAASSPQS TTTVTTTVSA AAASSLISSS 120 QPDPDRKQPE SDIGADTNLF FPLRNDIFPC TACGEIFQKP HLLETHQTLK HAVSDLPGSD 180 PGHNIVQIIF KSGWPESKPF PNVTRVLKIH NSPKILAKFE EYREAVKAKA ARHGALTRRP 240 DERCIADGNE LMRFHCSTFL CSLGHNGDSS ICSQQFCNVC GIIKSGFSSK LDGIATLSTS 300 WRAHVAIPED LEREFRFMNV KRAMLVCRVI AGRVGSDLDE AEKEDGGFDS VMARGESGVY 360 TRLDEEELLV FNPRALLPCF VIVYSV |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | C.cajan_15159 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020223808.1 | 0.0 | uncharacterized protein LOC109805926 | ||||
TrEMBL | A0A151SZA9 | 0.0 | A0A151SZA9_CAJCA; Uncharacterized protein | ||||
STRING | GLYMA18G07330.1 | 0.0 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF10668 | 29 | 36 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G29660.1 | 1e-102 | C2H2 family protein |