PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | C.cajan_13754 | ||||||||
Common Name | KK1_014176 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
|
||||||||
Family | MYB_related | ||||||||
Protein Properties | Length: 195aa MW: 21899 Da PI: 4.1697 | ||||||||
Description | MYB_related family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | Myb_DNA-binding | 31.5 | 4.2e-10 | 14 | 45 | 1 | 32 |
TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHT CS Myb_DNA-binding 1 rgrWTteEdellvdavkqlGggtWktIartmg 32 +g WT+eEd++lv +v+++G +W+ +r+ g C.cajan_13754 14 KGTWTPEEDKKLVAYVTRYGCWNWRQLPRYAG 45 799*****************99*******999 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50090 | 6.737 | 9 | 56 | IPR017877 | Myb-like domain |
SuperFamily | SSF46689 | 7.59E-8 | 10 | 43 | IPR009057 | Homeodomain-like |
Gene3D | G3DSA:1.10.10.60 | 2.2E-9 | 12 | 45 | IPR009057 | Homeodomain-like |
Pfam | PF00249 | 9.1E-7 | 14 | 45 | IPR001005 | SANT/Myb domain |
CDD | cd00167 | 6.84E-4 | 16 | 46 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 195 aa Download sequence Send to blast |
MVRTPSRDSS GLKKGTWTPE EDKKLVAYVT RYGCWNWRQL PRYAGKDAVG TNENVKGAKS 60 KSSGSKQDNM NGLFHTSSPT TFSDSYAATD QNSLLKDGLE NIWTEACVGN IDGTESIDNW 120 ALCESNEKLV VEDYDEFSFL EALQPLSANF WTEAYAAEMS LIPNEFLVPS VNQSDQYFSS 180 TYYDTDLWSQ SNTLE |
Cis-element ? help Back to Top | |
---|---|
Source | Link |
PlantRegMap | C.cajan_13754 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
TrEMBL | A0A151SVC2 | 1e-142 | A0A151SVC2_CAJCA; Myb-related protein Myb4 |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF16747 | 6 | 7 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G10280.1 | 5e-14 | myb domain protein 92 |