PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_11165
Common NameKK1_011492
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family MYB
Protein Properties Length: 374aa    MW: 42646.2 Da    PI: 9.1568
Description MYB family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_11165genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding53.46.1e-17165211148
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHHT CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqkyl 48 
                      +g WT+eEd  l ++v+q+G++ W+ Ia+ +   R +kqc++rw+++l
    C.cajan_11165 165 KGQWTPEEDSALMELVNQFGPKKWSQIAKSLS-SRIGKQCRERWLNHL 211
                      799*****************************.*************97 PP
2Myb_DNA-binding59.48e-19217261147
                      TSSS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHHHH CS
  Myb_DNA-binding   1 rgrWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwqky 47 
                      +++WT+eEd++l++a++++G++ W+ Ia++++ gR+++ +k++w++ 
    C.cajan_11165 217 KDSWTAEEDLILIEAHQEFGNK-WSEIAKRLP-GRSENTVKNHWNTT 261
                      679*******************.*********.************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5129427.003160215IPR017930Myb domain
SuperFamilySSF466891.49E-31162258IPR009057Homeodomain-like
SMARTSM007176.1E-15164213IPR001005SANT/Myb domain
PfamPF002496.6E-16165211IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.1E-26166216IPR009057Homeodomain-like
CDDcd001671.80E-13168211No hitNo description
PROSITE profilePS5129419.98216266IPR017930Myb domain
SMARTSM007179.0E-18216264IPR001005SANT/Myb domain
PfamPF002492.4E-17217261IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.601.9E-23217263IPR009057Homeodomain-like
CDDcd001671.30E-13219262No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 374 aa     Download sequence    Send to blast
MEFDPCFQGS QQLQNPCFKP QPQTTYPSQN SILIPPSPLP ILFQPHNTFH HFQEQTMTMS  60
SHSIASMKEG PSSTNIPIPL YGKMPSLSLS DGSLLRGSFA NIHRKVIWDF SQKTMVHPFE  120
GSSSNSPSPL FNEYELVMSD YHWDTDQRKK NVKGKKDTNN NNIIKGQWTP EEDSALMELV  180
NQFGPKKWSQ IAKSLSSRIG KQCRERWLNH LQPNIKKDSW TAEEDLILIE AHQEFGNKWS  240
EIAKRLPGRS ENTVKNHWNT TKRSRNCKRH KKNKNVTYEA SLLHTYVKRV TATEEASERL  300
KKTPSQKNKV MTCNCDELAL LLSCDNFSHA VFNGNYVPMQ VNNNDGGGGN IGYGAMAKDL  360
NHLMVEREMN IGHV
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1mse_C4e-421632652104C-Myb DNA-Binding Domain
1msf_C4e-421632652104C-Myb DNA-Binding Domain
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_11165
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020218345.10.0transcription factor MYB115
TrEMBLA0A151TDX90.0A0A151TDX9_CAJCA; Transcription factor MYB98
STRINGGLYMA05G08761.11e-110(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF143361018
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G27785.13e-53myb domain protein 118