PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_10884
Common NameKK1_011202
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family WRKY
Protein Properties Length: 354aa    MW: 40497.6 Da    PI: 6.0574
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_10884genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY93.22e-29118179159
                    ---SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS
           WRKY   1 ldDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 
                    ldDgy+WrKYGqK++ g++fpr+YYrCt++   gC ++k+v+rs+edp+++e+tY+g+H+++
  C.cajan_10884 118 LDDGYSWRKYGQKDILGAKFPRGYYRCTHRnvqGCLATKQVQRSDEDPTTIEVTYRGRHTCT 179
                    59***************************98999**************************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.804.7E-28110179IPR003657WRKY domain
PROSITE profilePS5081123.319113176IPR003657WRKY domain
SuperFamilySSF1182901.44E-25117179IPR003657WRKY domain
SMARTSM007743.1E-40118180IPR003657WRKY domain
PfamPF031065.7E-27119178IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 354 aa     Download sequence    Send to blast
MGESTKRKHT TLIHELIQGK ELAKQLSNLM VSSSPLTNET NGLLVEKILS SYEKALTMLN  60
KTNTMMDSNS SFTNGGSPRS EVVDHEFEHK AVFKKRKTMP RWTEQVKICS RTGLEGSLDD  120
GYSWRKYGQK DILGAKFPRG YYRCTHRNVQ GCLATKQVQR SDEDPTTIEV TYRGRHTCTH  180
AKHLNKAYPS NIKMDLKENH FHNDQKNQTL QEKIQQTPEG IFTFETELKV KTEEMETKED  240
IFPWFCFSSP SFGSENEDNM LHESMIENHF MEIFSPAFIS PATSESKPFC LPAYDLDSTG  300
LLCQNIQTSE SDITEILSAP TSVTNSPILD LDILLHKRDF DTEFPFNTLE FFSS
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
6ir8_A2e-20117178768OsWRKY45
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_10884
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU0195790.0EU019579.1 Glycine max WRKY43 (WRKY43) mRNA, partial cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020211127.10.0probable WRKY transcription factor 30
TrEMBLA0A151TXZ00.0A0A151TXZ0_CAJCA; Putative WRKY transcription factor 30
STRINGGLYMA19G44380.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF49334157
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G24110.12e-50WRKY DNA-binding protein 30