PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | C.cajan_02912 | ||||||||
Common Name | KK1_002981 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
|
||||||||
Family | bZIP | ||||||||
Protein Properties | Length: 163aa MW: 18642 Da PI: 10.0721 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 44.8 | 2.6e-14 | 56 | 114 | 4 | 62 |
XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 4 lkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkevaklkse 62 +++ +r+ +NRe+ArrsR RKk++ie L+ v+ L++ N++L +++ l + ++ ++ C.cajan_02912 56 DRKKKRMFSNRESARRSRMRKKQQIEVLQYHVDHLQTLNHQLSQKIIYLLECNQQINQH 114 7899***************************************9986665555555544 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 8.1E-13 | 53 | 117 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF07716 | 4.2E-12 | 55 | 102 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.162 | 55 | 118 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.0E-11 | 57 | 108 | No hit | No description |
Gene3D | G3DSA:1.20.5.170 | 1.3E-13 | 57 | 113 | No hit | No description |
CDD | cd14702 | 1.72E-12 | 58 | 106 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 60 | 75 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
---|---|---|---|---|---|---|
GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 163 aa Download sequence Send to blast |
MDPPHSLHHV PFLYSQLHLP SINNNPIQLP LHKSSPNTSS NSNNNNSDEA KALLDDRKKK 60 RMFSNRESAR RSRMRKKQQI EVLQYHVDHL QTLNHQLSQK IIYLLECNQQ INQHNAQLKE 120 KVSTLQVALS ELLVPAGSAE QHHHIPNGFL DESSTRPIAS SRA |
Cis-element ? help Back to Top | |
---|---|
Source | Link |
PlantRegMap | C.cajan_02912 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_020228490.1 | 1e-115 | basic leucine zipper 43 | ||||
TrEMBL | A0A151SPH4 | 1e-114 | A0A151SPH4_CAJCA; Transcriptional activator TAF-1 | ||||
STRING | XP_007155196.1 | 2e-83 | (Phaseolus vulgaris) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF13044 | 24 | 30 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT5G60830.1 | 1e-27 | basic leucine-zipper 70 |