PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID C.cajan_02206
Common NameKK1_002259
Organism
Cajanus cajan
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Phaseoleae; Cajanus
Family MYB_related
Protein Properties Length: 544aa    MW: 62718.4 Da    PI: 9.1843
Description MYB_related family protein
Gene Model
Gene Model ID Type Source Coding Sequence
C.cajan_02206genomeIIPGView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1Myb_DNA-binding23.99.4e-08338377345
                      SS-HHHHHHHHHHHHHTTTT-HHHHHHHHTTTS-HHHHHHHHH CS
  Myb_DNA-binding   3 rWTteEdellvdavkqlGggtWktIartmgkgRtlkqcksrwq 45 
                       WT+eE e l +  +q+G++ Wk++a  +g  + + ++k+ w+
    C.cajan_02206 338 GWTPEELEFLRKMKEQHGSD-WKSVAVALG--KHRFHVKDAWR 377
                      5*******************.********9..56677777666 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM007170.031262333IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.602.8E-4265352IPR009057Homeodomain-like
PROSITE profilePS500906.748331380IPR017877Myb-like domain
SMARTSM007170.015335382IPR001005SANT/Myb domain
SuperFamilySSF466894.02E-7336397IPR009057Homeodomain-like
PfamPF139216.1E-11339397No hitNo description
Gene3DG3DSA:1.10.10.609.7E-8353392IPR009057Homeodomain-like
PROSITE profilePS500907.166381449IPR017877Myb-like domain
SMARTSM007171.5385451IPR001005SANT/Myb domain
Gene3DG3DSA:1.10.10.604.9E-5393468IPR009057Homeodomain-like
SuperFamilySSF466891.18E-6435507IPR009057Homeodomain-like
PROSITE profilePS500907.631451504IPR017877Myb-like domain
SMARTSM0071726455506IPR001005SANT/Myb domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 544 aa     Download sequence    Send to blast
MDEKAKKKGG KDVEVMNSNI PDGKEVQFLD DNQERKMKKR KKYDSSLDGM QESDFSKPSK  60
KMRKVNGLKN NKGEDDDQHK QIKKSGGESQ HKDYNEDKDG SHYEKKKKKS SKESKSQVYN  120
EFESKEGGDD DQGKHIKKIK KSGGDGDQGK KMKKKKSGED SQHVDYDEFK SNEAKNDGQH  180
KKEEKRKKKK LSEESKSKYN EFKSNEDDGQ GKKMKKKKLH DKSKNKENNT SESPNPGHSG  240
SSKPKRVTFS DQVDVCCDGL VRGKRFTPEE DKRIELAVFD YIESHGLGDE GLDMVLNCIH  300
YPAVRDCWKE IGLALPERPQ LSVYNRAHVL FERSEKRGWT PEELEFLRKM KEQHGSDWKS  360
VAVALGKHRF HVKDAWRRIK SADANKGRWI QEEYQKLFDL VNVDLRGRAS QVHRKTKHGM  420
LRDNIGWEAI GDKFTRSSSS CCEKWYNKLT SPMVAHGVWS DTDDYRLVNA LFTLDACCME  480
EVDWDNLIEN RSGDVCRKRW NQMVQCIGEH GGKSFAEQIE ILAKRFCPDL LEVREAFDAI  540
PVSC
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
13741KKRKK
2183190EKRKKKKL
Cis-element ? help Back to Top
SourceLink
PlantRegMapC.cajan_02206
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020227626.10.0midasin
TrEMBLA0A151SMQ30.0A0A151SMQ3_CAJCA; Cyclin-D-binding Myb-like transcription factor 1
STRINGGLYMA13G19060.10.0(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF67041931
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G41020.11e-115MYB_related family protein