PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Brast07G101000.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
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Family | bZIP | ||||||||
Protein Properties | Length: 186aa MW: 21292.6 Da PI: 5.7056 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 27.3 | 7.9e-09 | 81 | 113 | 1 | 33 |
XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 1 ekelkrerrkqkNReAArrsRqRKkaeieeLee 33 e+e++r rr ++NRe+ArrsR RK++++ +L++ Brast07G101000.1.p 81 EEEIRRKRRVASNRESARRSRMRKQKQLGQLRD 113 789***************************987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 9.1E-6 | 78 | 153 | No hit | No description |
SMART | SM00338 | 0.0049 | 81 | 145 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 7.31E-6 | 84 | 140 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 88 | 103 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 5.46E-9 | 92 | 129 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 186 aa Download sequence Send to blast |
MYSGEVASVL LPPVVHLPPE STVSFDRYQY NHQTAVAHDH FLFQCHGFVD DEPFPPDNPP 60 PPPDNGSTSS EEPAAEERER EEEIRRKRRV ASNRESARRS RMRKQKQLGQ LRDANRGLLD 120 RLNRAIRDCG RVVRDNSRLR DERAELRRRL RELVPVVDDD AGMESSVTTL DDNDDESRML 180 AIAYS* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 84 | 105 | RRKRRVASNRESARRSRMRKQK |
2 | 97 | 104 | RRSRMRKQ |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Brast07G101000.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | EU730897 | 3e-42 | EU730897.1 Brachypodium distachyon clone BAC DB038O09, complete sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_010229875.2 | 1e-71 | basic leucine zipper 43 | ||||
TrEMBL | A0A0Q3H6P3 | 2e-70 | A0A0Q3H6P3_BRADI; Uncharacterized protein | ||||
STRING | BRADI1G43660.1 | 4e-60 | (Brachypodium distachyon) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1186 | 35 | 126 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G15830.1 | 9e-08 | basic leucine-zipper 3 |
Link Out ? help Back to Top | |
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Phytozome | Brast07G101000.1.p |