PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Brast06G187000.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
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Family | bZIP | ||||||||
Protein Properties | Length: 260aa MW: 28460.8 Da PI: 6.2866 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 37 | 7.6e-12 | 60 | 104 | 5 | 49 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkel 49 k+ +r+++NR++ArrsR +K ++++L+ LeaeNk L Brast06G187000.1.p 60 KVKKRRESNRISARRSRYKKATQMQNLQHQLSLLEAENKYLVRHQ 104 899***********************************9986544 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 4.3E-10 | 56 | 120 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.99 | 58 | 114 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.1E-8 | 59 | 109 | No hit | No description |
Pfam | PF00170 | 1.2E-8 | 60 | 103 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 5.13E-9 | 60 | 111 | No hit | No description |
CDD | cd14686 | 8.97E-11 | 62 | 110 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 63 | 78 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF12498 | 1.1E-23 | 127 | 234 | IPR020983 | Basic leucine-zipper, C-terminal |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 260 aa Download sequence Send to blast |
MPVQQMSGGG QYGGTSPNLA QNPDVGVRQV SSPLREQSPS TNNIEGEAET MGNMNFSPEK 60 VKKRRESNRI SARRSRYKKA TQMQNLQHQL SLLEAENKYL VRHQADLIQK YSNVAIDNRV 120 LKANVEALET KVKLVEEIIK RITSTDDVPQ VVSSLTSLGL YLSASPSNGA YETSVPTQNT 180 PFNNFTAVAT NGGVNNIYTP EATSTFQSQD RVALLQMQSE PSLEHLQRGV CDGVPSSSML 240 APQEVAPFDP NEFINMGMQ* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Brast06G187000.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024314191.1 | 1e-150 | LOW QUALITY PROTEIN: bZIP transcription factor RISBZ2 | ||||
TrEMBL | A0A0Q3K7X8 | 1e-161 | A0A0Q3K7X8_BRADI; Uncharacterized protein | ||||
STRING | BRADI1G55450.1 | 1e-159 | (Brachypodium distachyon) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP25202 | 5 | 5 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G24800.1 | 7e-16 | basic leucine zipper 9 |
Link Out ? help Back to Top | |
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Phytozome | Brast06G187000.1.p |