PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Brast05G197700.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
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Family | bZIP | ||||||||
Protein Properties | Length: 202aa MW: 20819.6 Da PI: 10.1639 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 52 | 1.5e-16 | 132 | 183 | 5 | 56 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 +r +r++kNRe+A+rsR+RK+a + +Le +v eL+ eN++L+ + e+lk + Brast05G197700.1.p 132 RRKKRMIKNRESASRSRARKQAHVTQLESEVRELQRENDDLRVKYEQLKASA 183 699*********************************************9765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 2.1E-11 | 128 | 195 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 11.645 | 130 | 180 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 1.8E-14 | 132 | 183 | No hit | No description |
CDD | cd14707 | 3.95E-20 | 132 | 186 | No hit | No description |
Pfam | PF00170 | 8.8E-14 | 132 | 182 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 2.13E-12 | 132 | 181 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 135 | 150 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0010200 | Biological Process | response to chitin | ||||
GO:2000028 | Biological Process | regulation of photoperiodism, flowering | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding | ||||
GO:0043621 | Molecular Function | protein self-association |
Sequence ? help Back to Top |
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Protein Sequence Length: 202 aa Download sequence Send to blast |
MAMAALEDDD DMWAVTTSPS ASPPATAAAA AISTALSLNS RLHLLASSSP FHPGFGVGGC 60 SRNAAAAPPP CFFSAAASSS FPHFAAPLDG AGRALERGMC GLAQPPAWSG AAPAGVGVVG 120 AGASGCGGPV ERRKKRMIKN RESASRSRAR KQAHVTQLES EVRELQREND DLRVKYEQLK 180 ASAEAPVPVK RTLKRVLSAP F* |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Brast05G197700.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_003578537.2 | 3e-85 | bZIP transcription factor TRAB1 isoform X1 | ||||
TrEMBL | A0A0Q3LF28 | 6e-84 | A0A0Q3LF28_BRADI; Uncharacterized protein | ||||
STRING | BRADI4G36587.1 | 3e-83 | (Brachypodium distachyon) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP9764 | 30 | 44 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17770.2 | 9e-19 | basic region/leucine zipper motif 27 |
Link Out ? help Back to Top | |
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Phytozome | Brast05G197700.1.p |