PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Brast04G264700.1.p
Organism
Brachypodium stacei
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family bZIP
Protein Properties Length: 467aa    MW: 50814.3 Da    PI: 8.1784
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Brast04G264700.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_134.25.5e-11159189434
                         XCHHHCHHHHHHHHHHHHHHHHHHHHHHHHH CS
              bZIP_1   4 lkrerrkqkNReAArrsRqRKkaeieeLeek 34 
                          k  rr+++NReAAr+sR+RKka+i++Le+ 
  Brast04G264700.1.p 159 AKTLRRLAQNREAARKSRLRKKAYIQNLETS 189
                         6889************************974 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.1E-4156212IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1709.9E-8157202No hitNo description
PROSITE profilePS502178.714158202IPR004827Basic-leucine zipper domain
PfamPF001703.2E-8159200IPR004827Basic-leucine zipper domain
SuperFamilySSF579595.13E-7162204No hitNo description
PROSITE patternPS000360163178IPR004827Basic-leucine zipper domain
PfamPF141443.9E-27241323IPR025422Transcription factor TGA like domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 467 aa     Download sequence    Send to blast
MGDRPWQQPH EQLAASCSAH TGMIQASSSA AAISSIHGNI IRKDPGGGYD DMAELDQALF  60
LYLNSQDQTS VQEQPQTLNI FPSRPMHVVV EPSPRTTAAN PAAPNVVAAA GSSKLQTPSR  120
PAPAPGNKAG KAAVKREGSG GGDGTPSTSE QEGPRTPNAK TLRRLAQNRE AARKSRLRKK  180
AYIQNLETSR IRLSQMEQEM QRCNTQGAIL AGGAGIGGLS PEAAWFDGEH ARWVEEHERM  240
MRHLRAAVEL DDNHLQRPDQ EEQQLRQMVD AAAAHHVVLA ELKSAVARAD VFHLVSGTWL  300
PAAERCFLWI GGSRPSDLIK VVSRHVEPLT EQQVASVCDV QRWVREREEA LDQELQAARS  360
SLSDVVCSDA LLSPYPDMAA YMAHMSLAIA NLSSLEAFVR QADTLRLQML HRLPQILTAR  420
QAARCFLAVA DYSQRLRALS SLWLARPRQG QGGQPTQPGA GGRIHP*
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapBrast04G264700.1.p
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003571241.10.0transcription factor TGAL9 isoform X1
SwissprotQ52MZ21e-139TGA10_TOBAC; bZIP transcription factor TGA10
TrEMBLA0A0Q3I0B40.0A0A0Q3I0B4_BRADI; Uncharacterized protein
STRINGPavir.J04905.1.p0.0(Panicum virgatum)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP27323669
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G06839.32e-95bZIP family protein