PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Brast04G010800.1.p | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
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Family | NAC | ||||||||
Protein Properties | Length: 598aa MW: 64926.1 Da PI: 9.8465 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 77.5 | 3.1e-24 | 2 | 147 | 9 | 127 |
NAM 9 PtdeelvveyLkkkvegkkleleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyatgkrknratk..sgyWk.atgkdkevlsk 95 P+deel+ +yL +k++g+++ + +i e ++y+++P++L k++k +e +wyf s+r++ky++gkr++r+t g+Wk +tg d + ++ Brast04G010800.1.p 2 PKDEELIRYYLLPKLQGRQHVPNPAIIEDNVYQCHPNKLIaKHAKRGEGSWYFLSPRERKYEHGKRPSRKTGdrLGRWKaSTGMDSATVKD 92 9******************8776789999**********8456666777********************9875579***668888877775 PP NAM 96 ...kgel......................vglkktLvfykgrapkgektdWvmheyr 127 + + v ++L +++g+ ++ +kt+W+mhe + Brast04G010800.1.p 93 ssaR--DgtvkesstgdgtvkksstsdgiVYNERVLGYFRGTVKEEKKTKWLMHELT 147 4550..15556677788888888999999999***********************76 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51005 | 29.913 | 1 | 176 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 1.96E-26 | 2 | 80 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.1E-11 | 2 | 147 | IPR003441 | NAC domain |
SuperFamily | SSF101941 | 1.96E-26 | 119 | 176 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 598 aa Download sequence Send to blast |
MPKDEELIRY YLLPKLQGRQ HVPNPAIIED NVYQCHPNKL IAKHAKRGEG SWYFLSPRER 60 KYEHGKRPSR KTGDRLGRWK ASTGMDSATV KDSSARDGTV KESSTGDGTV KKSSTSDGIV 120 YNERVLGYFR GTVKEEKKTK WLMHELTVPK FEKKLDENGG VNSTLDDYVM CKIYVTPRKK 180 GRDDDEAGPS CPTGLSESPS GTSSVHDQLG HPSKLSEKAA GKRLVFERQP PCRDAHAATI 240 ANAVKRARQG LQFGPRAQQV PTQARPTQAP LGGHAAGRPM AMSGRPRAPM PMPMPMSAGF 300 RGQAPRRPPG YLGQAAAPMG YHPGGQAPRP QPAGHRGQAP VPFIGQAQQA MATMRPSCPA 360 PAAGQAATPP SASRPPPPEQ QQQKQKQPET EEMKKARVIR QHLEEYFRLG HQGLLPSSMW 420 PPPCFAAQQQ CPITAFAEQQ QPQRPAMPFT QQQQQRPPMA FTQQQQQPTM AFTQQQQQQQ 480 PPMAFTHQQQ PYFVPNVVNQ HDPGMAGGTL PQFRLDNFYA SEAAGEFQGC SWEPMVLATG 540 DSAGAAAPAS VLLPRAGNEG NGAQDGDEKR LVEPGSPAKA SPAGSASAGG EDDDSSP* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
1ut4_A | 3e-14 | 2 | 174 | 25 | 163 | NO APICAL MERISTEM PROTEIN |
1ut4_B | 3e-14 | 2 | 174 | 25 | 163 | NO APICAL MERISTEM PROTEIN |
1ut7_A | 3e-14 | 2 | 174 | 25 | 163 | NO APICAL MERISTEM PROTEIN |
1ut7_B | 3e-14 | 2 | 174 | 25 | 163 | NO APICAL MERISTEM PROTEIN |
3swm_A | 3e-14 | 2 | 174 | 28 | 166 | NAC domain-containing protein 19 |
3swm_B | 3e-14 | 2 | 174 | 28 | 166 | NAC domain-containing protein 19 |
3swm_C | 3e-14 | 2 | 174 | 28 | 166 | NAC domain-containing protein 19 |
3swm_D | 3e-14 | 2 | 174 | 28 | 166 | NAC domain-containing protein 19 |
3swp_A | 3e-14 | 2 | 174 | 28 | 166 | NAC domain-containing protein 19 |
3swp_B | 3e-14 | 2 | 174 | 28 | 166 | NAC domain-containing protein 19 |
3swp_C | 3e-14 | 2 | 174 | 28 | 166 | NAC domain-containing protein 19 |
3swp_D | 3e-14 | 2 | 174 | 28 | 166 | NAC domain-containing protein 19 |
4dul_A | 3e-14 | 2 | 174 | 25 | 163 | NAC domain-containing protein 19 |
4dul_B | 3e-14 | 2 | 174 | 25 | 163 | NAC domain-containing protein 19 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Brast04G010800.1.p |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_024317252.1 | 2e-93 | mastermind-like protein 2 | ||||
TrEMBL | A0A0Q3FSJ2 | 0.0 | A0A0Q3FSJ2_BRADI; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP14361 | 20 | 24 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G08790.1 | 5e-21 | NAC family protein |
Link Out ? help Back to Top | |
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Phytozome | Brast04G010800.1.p |