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Plant Transcription
Factor Database
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Transcription Factor Information
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Basic
Information? help
Back to Top |
| TF ID |
Bradi4g41880.2.p |
| Organism |
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| Taxonomic ID |
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| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
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| Family |
GRAS |
| Protein Properties |
Length: 493aa MW: 53112.4 Da PI: 4.8366 |
| Description |
GRAS family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Bradi4g41880.2.p | genome | JGI | View CDS |
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| Signature Domain? help Back to Top |
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| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | GRAS | 174.7 | 7.1e-54 | 114 | 489 | 2 | 373 |
GRAS 2 velLlecAeavssgdlelaqalLarlselaspdgd..........pmqRlaayfteALaarlarsvselykalppsetseknsseelaalklf 84
+lL++ A+av++gd+ +a+a+L+++ ++ + ++ la yf+ L++ +ar + ++ + + +++l a++++
Bradi4g41880.2.p 114 DDLLMASATAVEAGDMVNASAILEKIDSIVLDGITcgrygavgssSFDHLACYFASSLRTGIAR------ARTECHPLA---LASRLPAYQML 197
689************************9965444445566677779******************......555666666...999******** PP
GRAS 85 sevsPilkfshltaNqaIleavegeervHiiDfdisqGlQWpaLlqaLasRpegppslRiTgvgspesgskeeleetgerLakfAeelgvpfe 177
+e+sP++kf+h+taNqaIlea+ e vH++D++++ G+QW +L+ L R +g+ +R+T+vgs ++ + + g+ L++fAe+lg+pf+
Bradi4g41880.2.p 198 QELSPFIKFAHFTANQAILEATLDEGGVHVVDLNVGDGVQWSSLMSDL-LRHGGSKPFRLTAVGS-----TTVTATPGRWLSEFAESLGLPFR 284
************************************************.67899999********.....7889999**************** PP
GRAS 178 fnvlvakrledleleeLrvkpgEalaVnl.vlqlhrlldesvsleserdevLklvkslsPkvvvvveqeadh.nse.........sFlerfle 259
++ + ++l++l e+ + g +++ ++ + + ++l+ ++++++ + + ++k l+Pk+v+++e e+++ +++ sF+e f+e
Bradi4g41880.2.p 285 YDEV--EDLHKL--TEI-ICGGSSVILSCdATGMSHTLA--MDTSQTLPLLTGVIKVLQPKLVILIEDELSRlGRTpppplaggaSFVELFSE 370
**95..666665..666.445677777772344555553..444444578889****************9986666899999999******** PP
GRAS 260 aleyysalfdsleaklpres.eer.ikvErellgreivnvvacegaerrer...hetlekWrerleeaGFkpvplsekaakqaklllrkvksd 347
a +++a+ +sl++ ++ + ++r + vE+e+lg++i+ ++++ + + ++ + +G+++ ++s ++ qak+l ++ +
Bradi4g41880.2.p 371 AWCHFAAVQESLASCFSGAGyKARlRLVEEEILGPSIEGAITATWPPHGSMtggTDAGPVASNGFPGSGYRTCEISGFNIVQAKMLAGLFS-R 462
************8887666555552689**************9877654440004444556888999************************.9 PP
GRAS 348 gyrve.eesgslvlgWkdrpLvsvSaW 373
g+ v +++g l l+WkdrpL+svS+W
Bradi4g41880.2.p 463 GFGVLhDKKGRLALCWKDRPLTSVSVW 489
9988736689999************** PP
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| Gene Ontology ? help Back to Top |
| GO Term |
GO Category |
GO Description |
| GO:0006355 | Biological Process | regulation of transcription, DNA-templated |
| GO:0005634 | Cellular Component | nucleus |
| GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
| GO:0043565 | Molecular Function | sequence-specific DNA binding |
| Sequence ? help Back to Top |
| Protein Sequence Length: 493 aa
Download sequence Send
to blast |
MLYAVEKYQN DQWKVSFAGS IRMTPRNPSF HLPASTRLIL LMLVFPHENA HIYDANPPGD 60
DRWQDHRFST MDVVQEADDL LQDYFPSAKI IEGDNLAVAV QDDSLVMEDS SSLDDLLMAS 120
ATAVEAGDMV NASAILEKID SIVLDGITCG RYGAVGSSSF DHLACYFASS LRTGIARART 180
ECHPLALASR LPAYQMLQEL SPFIKFAHFT ANQAILEATL DEGGVHVVDL NVGDGVQWSS 240
LMSDLLRHGG SKPFRLTAVG STTVTATPGR WLSEFAESLG LPFRYDEVED LHKLTEIICG 300
GSSVILSCDA TGMSHTLAMD TSQTLPLLTG VIKVLQPKLV ILIEDELSRL GRTPPPPLAG 360
GASFVELFSE AWCHFAAVQE SLASCFSGAG YKARLRLVEE EILGPSIEGA ITATWPPHGS 420
MTGGTDAGPV ASNGFPGSGY RTCEISGFNI VQAKMLAGLF SRGFGVLHDK KGRLALCWKD 480
RPLTSVSVWS PV*
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