PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bradi4g32090.1.p
Common NameBRADI_4g32090, LOC100845340
Organism
Brachypodium distachyon
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Brachypodieae; Brachypodium
Family bZIP
Protein Properties Length: 360aa    MW: 38634.4 Da    PI: 7.5124
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bradi4g32090.1.pgenomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_146.11.1e-14280331556
                       CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
            bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 
                       +r+rr++kNRe+A rsR+RK+a++ eLe +v++L++ N++L  e  e+ ++ 
  Bradi4g32090.1.p 280 RRQRRMIKNRESAARSRARKQAYTMELEAEVQKLKELNQKLEREQAEIMEMQ 331
                       79***************************************99998888875 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:1.20.5.1707.6E-14275327No hitNo description
SMARTSM003383.2E-12276345IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.036278329IPR004827Basic-leucine zipper domain
PfamPF001702.0E-12280331IPR004827Basic-leucine zipper domain
CDDcd147078.27E-25280332No hitNo description
SuperFamilySSF579596.25E-10280328No hitNo description
PROSITE patternPS000360283298IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 360 aa     Download sequence    Send to blast
MLTEDRWGGT EGIMEFKTGG SSSEHRPSVG GSTPLARQGS VYSLTFEEFQ STLGGGGLGK  60
DFSSMNMDEL LRSIWTTEER QAMASASASA SASAAGAGAG TPPTSLQRQG SLTLPRTLSA  120
KTVDEVWRNL VRDDPLAIGA DGGEPQPHRQ ATLGEMTLEE FLVKAGVVRE IPNAPPHPVP  180
VAPKNTAFYR NFPGANDAGA AMLGFPPSGM GDLALCNGLV PRAVGVGGNA GAVQTAANQL  240
DSDSKGSEDL SSPSEPMPYS FDGIVRGRRA GGGVEKVVER RQRRMIKNRE SAARSRARKQ  300
AYTMELEAEV QKLKELNQKL EREQAEIMEM QKNEDVPEMK DQFGRKKRQC LRRTLTGPW*
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that mediates abscisic acid (ABA) signaling. Binds specifically to the ABA-responsive element (ABRE) of the EMP1 and RAB16A gene promoters. {ECO:0000269|PubMed:10611387}.
Cis-element ? help Back to Top
SourceLink
PlantRegMapBradi4g32090.1.p
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: By abscisic acid (ABA). {ECO:0000269|PubMed:10611387}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_003578228.10.0bZIP transcription factor TRAB1
SwissprotQ6ZDF31e-107TRAB1_ORYSJ; bZIP transcription factor TRAB1
TrEMBLI1IQQ50.0I1IQQ5_BRADI; Uncharacterized protein
STRINGBRADI4G32090.10.0(Brachypodium distachyon)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP70638147
Representative plantOGRP5401580
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G34000.32e-42abscisic acid responsive elements-binding factor 3
Publications ? help Back to Top
  1. Kagaya Y,Hobo T,Murata M,Ban A,Hattori T
    Abscisic acid-induced transcription is mediated by phosphorylation of an abscisic acid response element binding factor, TRAB1.
    Plant Cell, 2002. 14(12): p. 3177-89
    [PMID:12468735]
  2. Kobayashi Y, et al.
    Abscisic acid-activated SNRK2 protein kinases function in the gene-regulation pathway of ABA signal transduction by phosphorylating ABA response element-binding factors.
    Plant J., 2005. 44(6): p. 939-49
    [PMID:16359387]
  3. Kobayashi F,Maeta E,Terashima A,Takumi S
    Positive role of a wheat HvABI5 ortholog in abiotic stress response of seedlings.
    Physiol Plant, 2008. 134(1): p. 74-86
    [PMID:18433415]