PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Bathy01g04040
Organism
Bathycoccus prasinos
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Chlorophyta; prasinophytes; Mamiellophyceae; Mamiellales; Bathycoccaceae; Bathycoccus
Family bZIP
Protein Properties Length: 296aa    MW: 33436.1 Da    PI: 7.4405
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Bathy01g04040genomeORCAEView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_124.94.5e-08222254133
                    XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHH CS
         bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLee 33 
                    e+e+kr +r+ +NR++A+  R+RKka++  Le+
  Bathy01g04040 222 ERERKRLKRLLRNRVSAQHARERKKAYMNSLEN 254
                    799****************************97 PP
2bZIP_121.74.4e-072592902455
                    HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
         bZIP_1  24 KkaeieeLeekvkeLeaeNkaLkkeleelkke 55 
                    ++ +++eLe+++k+Le+eN++L++ +++++++
  Bathy01g04040 259 RQSRLDELENRCKTLEKENEMLREVIKTYTQK 290
                    689***********************999876 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003387.6E-5222286IPR004827Basic-leucine zipper domain
PfamPF077161.6E-5224276IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.071224287IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.7E-10226284No hitNo description
SuperFamilySSF579592.25E-9226283No hitNo description
CDDcd147042.41E-13227277No hitNo description
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0009737Biological Processresponse to abscisic acid
GO:0009740Biological Processgibberellic acid mediated signaling pathway
GO:0010017Biological Processred or far-red light signaling pathway
GO:0010099Biological Processregulation of photomorphogenesis
GO:0010114Biological Processresponse to red light
GO:0010218Biological Processresponse to far red light
GO:0010224Biological Processresponse to UV-B
GO:0031539Biological Processpositive regulation of anthocyanin metabolic process
GO:0042753Biological Processpositive regulation of circadian rhythm
GO:0080167Biological Processresponse to karrikin
GO:0005634Cellular Componentnucleus
GO:0003690Molecular Functiondouble-stranded DNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 296 aa     Download sequence    Send to blast
MGYESHFEVP DIDDSLLRGV DDLTDLLCPD SHPEDYTNRV RFAHHHQETN PFQLHQFQPV  60
HVPVHVHGAT FAPVQTGLPT PEERARQSAK EIRQARKQVR LAAKGKQLLQ LKRKAGSEGV  120
QSFGGEAKPT SSTYTDNQDL QVVPDVDTIG RTNNAPATSS EGHSGYLVNS QEQNKDTTTT  180
YLAHTTSAPT TTSIMPPKKK NEDYDDGKEL PAMPTGNTAE DERERKRLKR LLRNRVSAQH  240
ARERKKAYMN SLENAERERQ SRLDELENRC KTLEKENEML REVIKTYTQK DPSAK*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1223230ERKRLKRL
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00117ampDAPTransfer from AT5G11260Download
Motif logo
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankFO0822780.0FO082278.1 Bathycoccus prasinos genomic : Chromosome_1.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_007515290.10.0predicted protein
TrEMBLK8E9870.0K8E987_9CHLO; Uncharacterized protein
STRINGXP_007515290.10.0(Bathycoccus prasinos)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
ChlorophytaeOGCP46161010
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11260.14e-12bZIP family protein