PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Araip.Y87HN | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | bZIP | ||||||||
Protein Properties | Length: 323aa MW: 36033.5 Da PI: 9.4023 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 35.1 | 2.9e-11 | 204 | 249 | 5 | 50 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkele 50 kr +r NR +A+rsR RK+++i eLe+ v +L++e +aL ++ Araip.Y87HN 204 KRVKRILANRQSAQRSRVRKLQYISELERSVTTLQTEVSALSPRVA 249 8999*********************************999987765 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SMART | SM00338 | 7.1E-14 | 200 | 264 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.703 | 202 | 254 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 1.2E-11 | 204 | 258 | No hit | No description |
Pfam | PF00170 | 7.8E-10 | 204 | 248 | IPR004827 | Basic-leucine zipper domain |
Gene3D | G3DSA:1.20.5.170 | 9.9E-14 | 204 | 255 | No hit | No description |
CDD | cd14703 | 5.32E-24 | 205 | 255 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 207 | 222 | IPR004827 | Basic-leucine zipper domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 323 aa Download sequence Send to blast |
MAQLPPKIPI IPQNWTPFHL QRAPQPLSNS TMSSFIPNSN ATATSNNNSA SSVQPQQLLS 60 SSTTSWVDEF LDFSSSRRGA HRRSASDSXX XXXXXXXXXX XXXXXXXXXX XXXXXXVAMQ 120 HPPPLSSASD PSSPSSDQTS NNDEKPAAMA LDIAPPLLMH EHNDNHVMKL KNEAVEEESF 180 GKNEEGAAPS SSATGTIETI VDPKRVKRIL ANRQSAQRSR VRKLQYISEL ERSVTTLQTE 240 VSALSPRVAF LDHQRLILNV DNSALKQRIA ALAQDKIFKD GNNTIFTPNY CFISFHILKN 300 QYTIQNKFKY IIFLSTSAFV LDK |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Araip.Y87HN |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AP015040 | 1e-42 | AP015040.1 Vigna angularis var. angularis DNA, chromosome 7, almost complete sequence, cultivar: Shumari. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025673517.1 | 1e-163 | basic leucine zipper 34 | ||||
TrEMBL | A0A444Y404 | 1e-162 | A0A444Y404_ARAHY; Uncharacterized protein | ||||
STRING | XP_004489061.1 | 4e-76 | (Cicer arietinum) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF2011 | 34 | 88 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G58120.1 | 2e-46 | bZIP family protein |