PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Araip.SC297 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | WRKY | ||||||||
Protein Properties | Length: 227aa MW: 25015.4 Da PI: 7.6705 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 30.3 | 8.3e-10 | 202 | 224 | 1 | 23 |
---SS-EEEEEEE--TT-SS-EE CS WRKY 1 ldDgynWrKYGqKevkgsefprs 23 ++Dg++WrKYGqKe+ gs++ rs Araip.SC297 202 MEDGFTWRKYGQKEILGSKYQRS 224 58******************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 5.5E-8 | 197 | 224 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 8.995 | 197 | 227 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 2.35E-7 | 199 | 224 | IPR003657 | WRKY domain |
Pfam | PF03106 | 8.0E-7 | 203 | 224 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 227 aa Download sequence Send to blast |
MEEVLNSISH GCELAKKIES EQLPNMANIQ PDILVSSIDE VVKAFNGAKE KLLMTMVNNN 60 LIGASSSSSS SSFAPLFNMH ETQQQMGACA SSFSSMMQEW MMKSSSSTSY AHTMDQVLLQ 120 MQHHQRQPQG FPLIGGAGGG GDLQQLRNVE GSSSMEKSMK GLEVQVHATQ LSPSRPRKRK 180 NDAEKRVVNL PAQQLGNTEM PMEDGFTWRK YGQKEILGSK YQRSLAS |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Araip.SC297 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016164597.1 | 1e-163 | WRKY transcription factor 55 | ||||
Refseq | XP_025667545.1 | 1e-163 | WRKY transcription factor 55-like | ||||
TrEMBL | A0A444YA34 | 1e-161 | A0A444YA34_ARAHY; Uncharacterized protein |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF8629 | 31 | 42 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40740.1 | 3e-22 | WRKY DNA-binding protein 55 |