PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Araip.PW8UQ | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | NAC | ||||||||
Protein Properties | Length: 256aa MW: 29756.9 Da PI: 6.0619 | ||||||||
Description | NAC family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | NAM | 139.5 | 2.1e-43 | 16 | 136 | 2 | 121 |
NAM 2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kg 97 pGfrFhPt+eel+++yLk+ v gkkl++ +vi ++iy+++PwdLp +k +e+ewyfF++rd+k+ tg r+nr+t++g+Wkatg+d+++++ + Araip.PW8UQ 16 LPGFRFHPTEEELLDFYLKNMVVGKKLRF-DVIGFLNIYHHDPWDLPGLAKVGEREWYFFVPRDRKHGTGGRPNRTTEKGFWKATGSDRKIVTLsdPK 112 69*************************99.99***************8888899*************************************9876667 PP NAM 98 elvglkktLvfykgrapkgektdW 121 + +gl+ktLvfy+grap+g+ktdW Araip.PW8UQ 113 RIIGLRKTLVFYEGRAPRGSKTDW 136 78********************** PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
SuperFamily | SSF101941 | 5.23E-49 | 9 | 146 | IPR003441 | NAC domain |
PROSITE profile | PS51005 | 44.857 | 15 | 165 | IPR003441 | NAC domain |
Pfam | PF02365 | 1.8E-20 | 17 | 136 | IPR003441 | NAC domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0009965 | Biological Process | leaf morphogenesis | ||||
GO:0010200 | Biological Process | response to chitin | ||||
GO:0045792 | Biological Process | negative regulation of cell size | ||||
GO:0048281 | Biological Process | inflorescence morphogenesis | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 256 aa Download sequence Send to blast |
MIDMGSSSVI DGEVTLPGFR FHPTEEELLD FYLKNMVVGK KLRFDVIGFL NIYHHDPWDL 60 PGLAKVGERE WYFFVPRDRK HGTGGRPNRT TEKGFWKATG SDRKIVTLSD PKRIIGLRKT 120 LVFYEGRAPR GSKTDWDIVL CKIYRKATSL KVLEQRAAIE EEMKQMVGSP ESTPSSTDTM 180 SYEEQQQNQN QNLQLLPTQH VVTKKEVEAE VEEEKMDKIP ELQMPMMITD WTQDTFWAQL 240 NSPWLQNYTY SNILNF |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
3ulx_A | 3e-42 | 4 | 146 | 1 | 168 | Stress-induced transcription factor NAC1 |
Search in ModeBase |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}. |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Araip.PW8UQ |
Regulation -- Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | INDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016187883.1 | 1e-160 | NAC transcription factor 32 | ||||
Refseq | XP_025642715.1 | 1e-160 | NAC domain-containing protein 22 | ||||
Swissprot | Q10S65 | 4e-87 | NAC22_ORYSJ; NAC domain-containing protein 22 | ||||
TrEMBL | A0A445A7M2 | 1e-159 | A0A445A7M2_ARAHY; Uncharacterized protein | ||||
STRING | GLYMA12G02540.1 | 1e-136 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF6214 | 32 | 51 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G17040.1 | 2e-93 | NAC domain containing protein 36 |
Publications ? help Back to Top | |||
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