PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Araip.PE7UC | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | WRKY | ||||||||
Protein Properties | Length: 311aa MW: 36033.2 Da PI: 6.9319 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 64 | 2.5e-20 | 163 | 223 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 +Dg++WrKYGqK+ +s++ rsYY+C+++ +C++ k+v+r +edp + +tY g+H+++ Araip.PE7UC 163 EDGHAWRKYGQKKTINSNYLRSYYKCSYKnekDCKAIKHVQRIQEDPPLYRTTYYGHHTCK 223 8***************************98899**************************97 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 3.2E-22 | 153 | 223 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 18.601 | 157 | 225 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 5.49E-21 | 158 | 223 | IPR003657 | WRKY domain |
SMART | SM00774 | 9.6E-30 | 162 | 224 | IPR003657 | WRKY domain |
Pfam | PF03106 | 2.7E-21 | 163 | 223 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 311 aa Download sequence Send to blast |
MENNNEVSKA KMMEQEIMRG RDMANQLLQV VVDSRNEEEI EKSTVMPYAE DAVRKVLRSF 60 TNTLLLLNNE DTRESSCNSN NKKKKSSSSN KSQKGCHKRK MENNNEVSKA KMMEQEIMRG 120 RDMANQLLQV VVDSRNEEEI EKSTVMPYAE DAVRKTDSSI LCEDGHAWRK YGQKKTINSN 180 YLRSYYKCSY KNEKDCKAIK HVQRIQEDPP LYRTTYYGHH TCKCSLITYP HTRLEPASSF 240 ESSMLLSFSS DHNTNNTLPV ITKQEAQPFP SSSTKQEPME VVVSNDRIDH NQSSSSNDYD 300 LLSDYELYFN Y |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6ir8_A | 1e-14 | 163 | 223 | 9 | 69 | OsWRKY45 |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Araip.PE7UC |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_016168349.2 | 1e-169 | probable WRKY transcription factor 38 |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF12638 | 11 | 34 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G22570.1 | 5e-23 | WRKY DNA-binding protein 38 |