PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Araip.I6HJK | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | ERF | ||||||||
Protein Properties | Length: 498aa MW: 56061.6 Da PI: 5.1856 | ||||||||
Description | ERF family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | AP2 | 49.3 | 1.2e-15 | 86 | 142 | 2 | 55 |
AP2 2 gykGVrwdkkrgrWvAeIrdpseng....krkrfslgkfgtaeeAakaaiaarkkleg 55 +++GVr++ +g+WvAeIr p + + k r +lg+f ta eAa a+++a++ ++g Araip.I6HJK 86 KFRGVRQRI-WGKWVAEIRKPINSKhvgeKANRLWLGTFSTALEAAFAYDEAARTMYG 142 79****998.**********87755766666***********************9987 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:3.30.730.10 | 2.0E-27 | 86 | 151 | IPR001471 | AP2/ERF domain |
Pfam | PF00847 | 4.5E-10 | 86 | 142 | IPR001471 | AP2/ERF domain |
SuperFamily | SSF54171 | 4.32E-17 | 86 | 151 | IPR016177 | DNA-binding domain |
CDD | cd00018 | 1.41E-26 | 86 | 152 | No hit | No description |
SMART | SM00380 | 8.4E-31 | 86 | 156 | IPR001471 | AP2/ERF domain |
PROSITE profile | PS51032 | 21.311 | 86 | 150 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 4.2E-8 | 87 | 98 | IPR001471 | AP2/ERF domain |
PRINTS | PR00367 | 4.2E-8 | 116 | 132 | IPR001471 | AP2/ERF domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0010286 | Biological Process | heat acclimation | ||||
GO:0045893 | Biological Process | positive regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003677 | Molecular Function | DNA binding | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 498 aa Download sequence Send to blast |
MSRILNNNKK TETIPRILVF AVEIGDRVGD ALEVESILEK WKEYNKQQQQ LISEGDEVEV 60 IHKVPAKGSR KGCMRGKGGP QNYDYKFRGV RQRIWGKWVA EIRKPINSKH VGEKANRLWL 120 GTFSTALEAA FAYDEAARTM YGPGARLNFP HHYGIKSIGS NGSSISTGFD QKSPSGTYVD 180 ILNSDNVAKV DWLEGNLGMG LEEQLKFSQA NELLEMECEG GILQEPFKNS GIVEECNNYM 240 LENPTCMAMT CMAMNIGADY NSCDTTAQGM TEKSEVENYK SSNELNCTNH CFGYLHNMIP 300 NSNPKYEQFN NLKSEATIPT KDMEGVLAEI LQFYRTCSEM NNVQSQIDQF TYKQYIVSDC 360 KNEAANIIGD SKNHSMQRSN YLVTSGTFGS IANVSENEDL NINNTNKDST LQEKRNHENS 420 ECGCSSGQSR KCSDTRCSDT SQQLQNLGGY LPEHLNNIQF ADMEVGHDYS FLSPDYDFGL 480 LEEKKLLDVC FSRRRSRS |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5wx9_A | 8e-17 | 86 | 157 | 14 | 79 | Ethylene-responsive transcription factor ERF096 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Araip.I6HJK |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020978191.1 | 0.0 | uncharacterized protein LOC107636903 | ||||
TrEMBL | A0A444ZK67 | 0.0 | A0A444ZK67_ARAHY; Uncharacterized protein | ||||
STRING | XP_007140202.1 | 1e-131 | (Phaseolus vulgaris) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF13286 | 21 | 27 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT2G40350.1 | 5e-30 | ERF family protein |