PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.B07N1
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 358aa    MW: 39442.3 Da    PI: 7.1301
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.B07N1genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY102.72.1e-32188245259
                  --SS-EEEEEEE--TT-SS-EEEEEE-STT---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsagCpvkkkversaedpkvveitYegeHnhe 59 
                  +Dgy+WrKYGqK vk+s++prsYYrCt+++C+vkk+ver+ +dp++v++tYeg+Hnh+
  Araip.B07N1 188 EDGYRWRKYGQKAVKNSPYPRSYYRCTTQKCSVKKRVERCYQDPTTVITTYEGQHNHP 245
                  8********************************************************7 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.808.1E-35172247IPR003657WRKY domain
SuperFamilySSF1182903.92E-29179247IPR003657WRKY domain
PROSITE profilePS5081132.592182247IPR003657WRKY domain
SMARTSM007742.8E-37187246IPR003657WRKY domain
PfamPF031063.3E-25188245IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 358 aa     Download sequence    Send to blast
MSDEAKQLLY QDLILDHHQN QNIIAGGGRL SNNMFCEKQF PSSSSSSQVA FDPSSYMSFT  60
ECLQGGMDYN SLATSFGLSP SSSEVFSSIE GNNNNQKLEG DVLGTGGGGG GSETLATLNS  120
SISSSSSEAG GEEDSGKSNK DSQVKEEAAG ETSKKGNKEN NNNKKKGEKK QKEPRFAFMT  180
KSEVDHLEDG YRWRKYGQKA VKNSPYPRSY YRCTTQKCSV KKRVERCYQD PTTVITTYEG  240
QHNHPVPTSL RGNAASMFTP SMLSISAPTP LLSSAAHHDL ALFAPLSHHH NQYSAASGSL  300
FHHHQSINNN FNNNNNNNNN NSLLLLNHHH HPYNNQQLPP EYGLLQDMLP SMFLKQEP
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
1wj2_A2e-271802471077Probable WRKY transcription factor 4
2lex_A2e-271802471077Probable WRKY transcription factor 4
Search in ModeBase
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00440DAPTransfer from AT4G18170Download
Motif logo
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.B07N1
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016190524.10.0probable WRKY transcription factor 71
RefseqXP_025639697.10.0WRKY transcription factor 71
TrEMBLA0A445DMB91e-168A0A445DMB9_ARAHY; Uncharacterized protein
STRINGGorai.009G157300.11e-107(Gossypium raimondii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF22313483
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT4G18170.16e-51WRKY DNA-binding protein 28