PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.A7VQW
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 236aa    MW: 27160.7 Da    PI: 9.9722
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.A7VQWgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR182.85.7e-2665150290
         FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                  fYn+YA++vGF vr+sk ++ + +++ + r fvC+keg+r + k++  +  r+raetr+gCka+++v+k k+g w+vt++++eH+H+la
  Araip.A7VQW  65 FYNAYATSVGFIVRVSKARS-RIDNSAIGRIFVCNKEGYRMTGKRE--NVLRQRAETRVGCKAMIMVRKAKSGSWVVTHFVKEHTHPLA 150
                  **************998655.68888***************99988..8999***********************************96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031012.1E-2365150IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 236 aa     Download sequence    Send to blast
RRDVLGNTIH QFPDSKSQSF ENLQELTAGK VAANLESPRS RIYRNSPVEP YVGQEFESEA  60
EAHAFYNAYA TSVGFIVRVS KARSRIDNSA IGRIFVCNKE GYRMTGKREN VLRQRAETRV  120
GCKAMIMVRK AKSGSWVVTH FVKEHTHPLA GPGGGRRDFI YEQYSGERDR IRKLNQQLTA  180
EKKRSVTYKR HLELILEHID EYNESLSKKI QHIVDNVKEM ESKEEQSQLN FQLATL
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.A7VQW
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025679133.11e-176protein FAR1-RELATED SEQUENCE 4-like
TrEMBLA0A444YNU11e-145A0A444YNU1_ARAHY; Uncharacterized protein
STRINGXP_007131945.11e-94(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF24533072
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.25e-86FAR1 family protein