PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.9N55L
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 480aa    MW: 53855.8 Da    PI: 4.7798
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.9N55LgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR137.29.5e-121221654890
         FAR1  48 tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                  t+++r+++aetr+gC+a+++v+ ++ +g+w +++++  HnHel 
  Araip.9N55L 122 TQRKREPKAETRCGCEAEMRVHVHSeSGRWIISHFQDVHNHELL 165
                  58999******************999****************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031017.3E-9121165IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 480 aa     Download sequence    Send to blast
MEGESAADEC YRPLSAEEEG GDGSDAFGPG GDKFGDDVED GKLGVELDAE ENFGESFFDN  60
WEERAVDGIA ELGCINFKQI TAKEILMCHF PDRSVAFLFY SLYAKMNGFA GFRGMGSVND  120
GTQRKREPKA ETRCGCEAEM RVHVHSESGR WIISHFQDVH NHELLDDRLT FMLPGHRKMD  180
AAALEQMNMM LRVGIKTPQI YSSFVQTSGK FQNLPFLKRD MEAHSDLLSV VREPVLQSPF  240
LDLERSAAKK LTRAIFFNFR PMLFRACTLK SLGIPCDHIV AVLVHLEMTD IPDSLVLDRW  300
SKSTRSKVRA FVEKGPFCWD STITCRNWIL NDLCREICVL ACRHEAEFAE MTDKVLHEIA  360
RLKEIQDSGD AGGLNEVGEA STLEGCVNDP ELVRCQKRQR KEMLKGVKRC GLCRQTGHNR  420
VSCHLNPNSR MNTQKGASYF GGEGEGETGT MEDLSEEEEL AWDDAVDLAL DEGYDSQGTI
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.9N55L
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025702549.11e-144protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A445CK010.0A0A445CK01_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3613639
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28530.12e-11FAR1-related sequence 10