PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Araip.20FU5
Organism
Arachis ipaensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family WRKY
Protein Properties Length: 266aa    MW: 30242.2 Da    PI: 8.3536
Description WRKY family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Araip.20FU5genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1WRKY87.51.1e-2796154259
                  --SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS
         WRKY   2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 
                  +Dgy+WrKYGqK+ k++  pr+Y+rC++a +Cp+kkkv+++ +d+++++ tY geHnh 
  Araip.20FU5  96 RDGYQWRKYGQKVTKDNVSPRAYFRCSMApSCPAKKKVQKCIHDKSILVATYDGEHNHA 154
                  7***************************99****************************6 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
Gene3DG3DSA:2.20.25.801.4E-2789155IPR003657WRKY domain
PROSITE profilePS5081123.57190156IPR003657WRKY domain
SuperFamilySSF1182903.14E-2491154IPR003657WRKY domain
SMARTSM007745.9E-3095155IPR003657WRKY domain
PfamPF031069.4E-2397153IPR003657WRKY domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    Send to blast
MDEKVEALQV ELQRVKEENS ALRLMFEVLS NKFKSLQSQI QDINKESEQI IGFNNSMPIV  60
DSTNCKRPRL LEFPTAKRPL QIFVRINPKD DTLMIRDGYQ WRKYGQKVTK DNVSPRAYFR  120
CSMAPSCPAK KKVQKCIHDK SILVATYDGE HNHAAIQDSS MPSSSTPKGS VVNKNNNNNS  180
KNNNDLPLPI LENYKKWSHQ TDSIRLCCDD VTMQKSNTKI EEYANSLIKD PEFTAALAEA  240
VARTITGQSK EQDLNLNLGF QQGDEN
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
2ayd_A2e-18941531371WRKY transcription factor 1
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapAraip.20FU5
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_016207837.10.0probable WRKY transcription factor 40
RefseqXP_025659866.10.0probable WRKY transcription factor 40
TrEMBLA0A445CWM50.0A0A445CWM5_ARAHY; Uncharacterized protein
STRINGAES590821e-96(Medicago truncatula)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF73983044
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G80840.12e-38WRKY DNA-binding protein 40