PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.ZS6PI
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family Trihelix
Protein Properties Length: 371aa    MW: 40998.1 Da    PI: 10.0161
Description Trihelix family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.ZS6PIgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1trihelix49.31.3e-1552135186
     trihelix   1 rWtkqevlaLiearremeerlrrgklkkplWeevskkm....rergferspkqCkekwenlnkrykkikegekkrtsessstcpyfdqle 86 
                  +W++  v +L+ea+++++   +r+klk+++We+v++++     +++  ++++qCk+k+e+++kry+ + +++        s++p++++l+
  Aradu.ZS6PI  52 EWSEGAVSTLLEAYESKWVLRNRAKLKGHDWEDVARHVssraNSTKSPKTQTQCKNKIESMKKRYRSESATADA------SSWPLYSRLD 135
                  5*************************************88777778889999****************999996......4799999986 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF138376.3E-2050135No hitNo description
Sequence ? help Back to Top
Protein Sequence    Length: 371 aa     Download sequence    Send to blast
MEDKDEDSNN NKNNNQHHHN HPKEEPLIIR KHNTIGGGSG SGSGGDRLKR DEWSEGAVST  60
LLEAYESKWV LRNRAKLKGH DWEDVARHVS SRANSTKSPK TQTQCKNKIE SMKKRYRSES  120
ATADASSWPL YSRLDLLLRG TGPVPTASTL AASPLKLSPT LQAVPVTVTV AAAAATGSHQ  180
SLHFSNNQQP LMLLEQPPSS QALHQPPPPP GTVAAPPPPA TTAQNSHGSN GVERVITKED  240
GLLGTKSCEH VSNKNEVETD SSTPALYSEK DKLRCNKRKM KMESNKQRRR KEEMEIAGSI  300
RWLAEVVVRS EQARMDTMKE IEKMRVEAEA KRAEMDLKRT EIIANTQLEI ARIFASVNNK  360
GVDSSLRIGR S
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1276290KRKMKMESNKQRRRK
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.ZS6PI
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015946875.10.0trihelix transcription factor ASIL2
TrEMBLA0A445B1B10.0A0A445B1B1_ARAHY; Uncharacterized protein
STRINGXP_007148925.11e-147(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF49943350
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G54390.11e-108sequence-specific DNA binding transcription factors