PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aradu.UV8L7 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | bHLH | ||||||||
Protein Properties | Length: 447aa MW: 50713.4 Da PI: 5.8693 | ||||||||
Description | bHLH family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | HLH | 38.5 | 2e-12 | 271 | 316 | 4 | 54 |
HHHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHH CS HLH 4 ahnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksL 54 +h e+Er+RR+++N++f Lr ++P+ +++Ka+ L Av YI++L Aradu.UV8L7 271 NHVEAERQRREKLNHRFYALRAVVPNV-----SRMDKASLLSDAVAYINEL 316 799***********************6.....4***************998 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF14215 | 4.7E-41 | 2 | 153 | IPR025610 | Transcription factor MYC/MYB N-terminal |
SuperFamily | SSF47459 | 4.06E-17 | 267 | 333 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
PROSITE profile | PS50888 | 16.71 | 267 | 316 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
CDD | cd00083 | 4.41E-14 | 270 | 321 | No hit | No description |
Pfam | PF00010 | 6.1E-10 | 271 | 316 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene3D | G3DSA:4.10.280.10 | 6.1E-17 | 271 | 333 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
SMART | SM00353 | 2.7E-15 | 273 | 322 | IPR011598 | Myc-type, basic helix-loop-helix (bHLH) domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0046983 | Molecular Function | protein dimerization activity |
Sequence ? help Back to Top |
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Protein Sequence Length: 447 aa Download sequence Send to blast |
MLQQNLQFLL QSQPSWWVYA IFWSTTKDDN GNLYLAWGEG HFQGNTTEHT KTQQQHNQND 60 AEWFYVMSLT RTFSIANSSS SSLPGKAFAL GSVLWLNSKE ELQFYNCERA KEAHAHGIET 120 LICIPTSNGV VEMGSYNTIP QNWNLINHVK SVFEDSMVNN NNNNNNNNHC NNNNLHNTVQ 180 QIFEDNDDFS FAEISFMAGL EEGREQVISR KQADVTVAFN KESKDSYAES EHSDSDCPFL 240 KTENTENKNK SEAPKSKRGR KPVLNRETPV NHVEAERQRR EKLNHRFYAL RAVVPNVSRM 300 DKASLLSDAV AYINELKAKI KDLESEKDNY QRKKKVKLET GDTMDNQSTV TNSSTVVDQE 360 KCSNGVVAEV DVKIIGDDAM VRVQSENVNH PGARLMGVLR DMEFQVHHAS MTCVNELMLQ 420 DVVGKVPNGI FTSEEGIRSA ILMRLDH |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5gnj_A | 2e-28 | 264 | 345 | 1 | 83 | Transcription factor MYC2 |
5gnj_B | 2e-28 | 264 | 345 | 1 | 83 | Transcription factor MYC2 |
5gnj_E | 2e-28 | 264 | 345 | 1 | 83 | Transcription factor MYC2 |
5gnj_F | 2e-28 | 264 | 345 | 1 | 83 | Transcription factor MYC2 |
5gnj_G | 2e-28 | 264 | 345 | 1 | 83 | Transcription factor MYC2 |
5gnj_I | 2e-28 | 264 | 345 | 1 | 83 | Transcription factor MYC2 |
5gnj_M | 2e-28 | 264 | 345 | 1 | 83 | Transcription factor MYC2 |
5gnj_N | 2e-28 | 264 | 345 | 1 | 83 | Transcription factor MYC2 |
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Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Aradu.UV8L7 |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | DQ099279 | 0.0 | DQ099279.1 Arachis hypogaea clone Ah-331 microsatellite sequence. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015947924.1 | 0.0 | transcription factor bHLH14 | ||||
TrEMBL | A0A445EHQ7 | 0.0 | A0A445EHQ7_ARAHY; Uncharacterized protein | ||||
STRING | GLYMA16G02320.2 | 1e-174 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF841 | 34 | 116 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G32640.1 | 1e-57 | bHLH family protein |