PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.RW9W8
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 319aa    MW: 35561.9 Da    PI: 4.9367
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.RW9W8genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR187.71.7e-27147233290
         FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                  fYn+YA++vGF vr+sk ++s+ +++ + r fvC+keg+r ++k++  +  r+raetr+gCka+++v+k k+g w+vt++++eH+H+la
  Aradu.RW9W8 147 FYNAYATSVGFIVRVSKLSRSRIDNSAIGRIFVCNKEGYRMTDKRE--NVIRQRAETRVGCKAMIMVRKVKSGSWVVTRFVKEHTHPLA 233
                  ******************************************9988..9999***********************************96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031013.2E-25147233IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 319 aa     Download sequence    Send to blast
MPRIPPILFL FYFAVFTLQL LTQAVSRSVF YVNLILMEVE IDGSNNGEAI ENAAMADDCS  60
TDEGNNADEA NNADEGNNAD EGNNGDDGNN IDGRAIVSVQ SQGQDVTQVS AGGAITLAVP  120
ALPVPIVSPV EPYVGQEFES EAEAHAFYNA YATSVGFIVR VSKLSRSRID NSAIGRIFVC  180
NKEGYRMTDK RENVIRQRAE TRVGCKAMIM VRKVKSGSWV VTRFVKEHTH PLAGPGGGRR  240
DFIYEQYPGE RDRIRELNQQ LTAEKKRSAT YKRHLELILE HIDEYNESLS KKIQHIVDNV  300
KEMESKEEQS QLNFQLATL
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.RW9W8
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015952131.10.0protein FAR1-RELATED SEQUENCE 4
TrEMBLA0A445E4240.0A0A445E424_ARAHY; Uncharacterized protein
STRINGXP_007150433.11e-111(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF24533072
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.22e-91FAR1 family protein