PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
|
Home TFext BLAST Prediction Download Help About Links PlantRegMap |
Transcription Factor Information
Basic Information? help Back to Top | |||||||||
---|---|---|---|---|---|---|---|---|---|
TF ID | Aradu.N2PLN | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
|
||||||||
Family | BES1 | ||||||||
Protein Properties | Length: 265aa MW: 28309.7 Da PI: 6.3516 | ||||||||
Description | BES1 family protein | ||||||||
Gene Model |
|
Signature Domain? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | DUF822 | 37 | 1.2e-11 | 52 | 123 | 72 | 143 |
DUF822 72 gskpleeaeaagssasaspesslqsslkssalaspvesysaspksssfpspssldsislasa.asllpvlsvl 143 g+k++ + e++g+ a++s +sslq s++ssa++spv+sy+asp+sssfpsps + +++++ + llp++ + Aradu.N2PLN 52 GCKRP-QGEIGGTPANMSGCSSLQPSPQSSAFPSPVPSYHASPTSSSFPSPSLALIPTIQNPsSFLLPFIYNI 123 88999.9*********************************************988888887744456666555 PP |
Protein Features ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Pfam | PF05687 | 4.1E-8 | 52 | 103 | IPR008540 | BES1/BZR1 plant transcription factor, N-terminal |
Sequence ? help Back to Top |
---|
Protein Sequence Length: 265 aa Download sequence Send to blast |
MVVTVSSVTA DMVISHERTD DDSKGSKNKK SDSEFLAIPA DLDKQAKEDV TGCKRPQGEI 60 GGTPANMSGC SSLQPSPQSS AFPSPVPSYH ASPTSSSFPS PSLALIPTIQ NPSSFLLPFI 120 YNITSIPTNL PPLRISNSAL VTFSLSSLTS RGSKRKADFE SLFNVSSLNS FHHPLFTVSV 180 PSNPSRCHQL ATFTIPKGDE SDAFTVLTTT ASAVPPSPTI NLGKSAMQQI SPQDSMDMNE 240 GMQWGQAAER GRPSDFDFEN GRVKP |
Cis-element ? help Back to Top | |
---|---|
Source | Link |
PlantRegMap | Aradu.N2PLN |
Regulation -- PlantRegMap ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
---|---|---|---|---|---|---|---|
Source | Hit ID | E-value | Description | ||||
Refseq | XP_016185891.1 | 1e-105 | BES1/BZR1 homolog protein 2-like | ||||
Refseq | XP_025636219.1 | 1e-105 | BES1/BZR1 homolog protein 2-like | ||||
TrEMBL | A0A445BPQ5 | 3e-87 | A0A445BPQ5_ARAHY; Uncharacterized protein | ||||
STRING | XP_009349751.1 | 1e-64 | (Pyrus x bretschneideri) |
Orthologous Group ? help Back to Top | |||
---|---|---|---|
Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1275 | 34 | 105 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
---|---|---|---|---|---|---|
Hit ID | E-value | Description | ||||
AT4G36780.1 | 7e-20 | BES1/BZR1 homolog 2 |