PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.F5TUU
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 247aa    MW: 28270.2 Da    PI: 8.5662
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.F5TUUgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR192.36e-2983170291
         FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHelap 91 
                  fYn+YA++vGF +r+sk ++s+r+g+ + r +vC+keg+r ++k++  k  r+raetr+gC+a++ v+k ++gkw+vtk+++eH+H+l+p
  Aradu.F5TUU  83 FYNAYATRVGFVIRVSKLSRSRRDGSAIGRALVCNKEGYRMPDKRE--KIVRQRAETRVGCRAMILVRKVSSGKWVVTKFVKEHTHPLTP 170
                  ******************************************9988..9**************************************986 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031013.6E-2683170IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 247 aa     Download sequence    Send to blast
MLEPLCMKYI VLRTILFSVE LGIDGSINGE TIAHATIGEV SSSFADEDKI ASCSFDPAYK  60
QDQDADEPYV GQEFDSEATA HAFYNAYATR VGFVIRVSKL SRSRRDGSAI GRALVCNKEG  120
YRMPDKREKI VRQRAETRVG CRAMILVRKV SSGKWVVTKF VKEHTHPLTP GKGRRDCIYE  180
QYPNEHDKIR ELSQQLAIEK KRCAAYKRQL ELLFEHIEEH NNSLSKKIQH IVGNVKEIEA  240
EEQQRHR
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.F5TUU
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankAP0150401e-112AP015040.1 Vigna angularis var. angularis DNA, chromosome 7, almost complete sequence, cultivar: Shumari.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_025613770.11e-164protein FAR1-RELATED SEQUENCE 2 isoform X1
RefseqXP_025613771.11e-164protein FAR1-RELATED SEQUENCE 2 isoform X2
TrEMBLA0A444Y8K51e-162A0A444Y8K5_ARAHY; Uncharacterized protein
STRINGXP_007150433.11e-136(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF24533072
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.21e-105FAR1 family protein