PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.DP2D5
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family bHLH
Protein Properties Length: 266aa    MW: 29603.6 Da    PI: 7.1987
Description bHLH family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.DP2D5genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1HLH37.63.9e-1278123555
                  HHHHHHHHHHHHHHHHHHHHCTSCCC...TTS-STCHHHHHHHHHHHHHHH CS
          HLH   5 hnerErrRRdriNsafeeLrellPkaskapskKlsKaeiLekAveYIksLq 55 
                  h ++Er RR++i + f  L  l+P +     kK++Ka++L  A++Y+k+Lq
  Aradu.DP2D5  78 HIIAERMRREKISQQFIALSALIPGL-----KKMDKATVLGDAIKYVKQLQ 123
                  899***********************.....9******************9 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5088814.58973122IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SuperFamilySSF474595.89E-1777139IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene3DG3DSA:4.10.280.109.0E-1778135IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
CDDcd000831.01E-1178127No hitNo description
PfamPF000101.1E-978123IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
SMARTSM003534.7E-1479128IPR011598Myc-type, basic helix-loop-helix (bHLH) domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0046983Molecular Functionprotein dimerization activity
Sequence ? help Back to Top
Protein Sequence    Length: 266 aa     Download sequence    Send to blast
MISTEESWTT WLCDLEEEDY SFINGIIAAP NNYSNSQMSN NDNERPSKLL KSTTPTPRRR  60
RTTGSAGTGR SPQHAHDHII AERMRREKIS QQFIALSALI PGLKKMDKAT VLGDAIKYVK  120
QLQEQVKVLE TESKRKSAES VVYVEKSEVC GEEDVSVSDT WSNSGGDGNS SYEVSKAVSR  180
SVLPEVEARV SEKNVLIRIH CEKHKGVLMH ILKLIDKLHL SVLNTTSLPF GASIVDITIT  240
AEMDDKFSLS AKELARNIRV GVLQSM
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5gnj_A1e-1377151880Transcription factor MYC2
5gnj_B1e-1377151880Transcription factor MYC2
5gnj_E1e-1377151880Transcription factor MYC2
5gnj_F1e-1377151880Transcription factor MYC2
5gnj_G1e-1377151880Transcription factor MYC2
5gnj_I1e-1377151880Transcription factor MYC2
5gnj_M1e-1377151880Transcription factor MYC2
5gnj_N1e-1377151880Transcription factor MYC2
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.DP2D5
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015963748.10.0transcription factor NAI1
TrEMBLA0A444ZAU11e-136A0A444ZAU1_ARAHY; Uncharacterized protein
STRINGGLYMA01G40611.12e-87(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF45534164
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G22760.12e-49bHLH family protein