PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.C56FC
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 216aa    MW: 25111.6 Da    PI: 9.2472
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.C56FCgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR183.24.4e-2644130290
         FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkktekerrtraetrtgCkaklkvkkekdgkwevtkleleHnHela 90 
                  fYn+YA++vGF vr+sk ++s+ +++++ r fvC+keg+r ++k++  +  r+raetr+gCka+++v+k k+  w+vt + +eH H+la
  Aradu.C56FC  44 FYNAYATSVGFIVRVSKLSRSRIDNSTIGRIFVCNKEGYRMTDKRE--NVIRQRAETRVGCKAMIMVRKVKSVSWVVTCFIKEHAHPLA 130
                  9*****************************************9988..9999***********************************96 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031019.8E-2444130IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 216 aa     Download sequence    Send to blast
MFLELTAGKV AANLESPRSR IYRNSPVEPY VGQEFESEAE AHVFYNAYAT SVGFIVRVSK  60
LSRSRIDNST IGRIFVCNKE GYRMTDKREN VIRQRAETRV GCKAMIMVRK VKSVSWVVTC  120
FIKEHAHPLA GPGGGRRDFI YEQYPGEWDR IRELNQQLTT EKKRSVTYKR HLEVEHIDVD  180
EYNESLLKKI QHIVYNVKEM ESKEEQSQLN FQSATL
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.C56FC
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015942787.11e-159protein FAR1-RELATED SEQUENCE 1-like
TrEMBLA0A445BPF81e-138A0A445BPF8_ARAHY; Uncharacterized protein
STRINGXP_007131945.13e-92(Phaseolus vulgaris)
STRINGXP_007150433.15e-92(Phaseolus vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF24533072
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G59470.21e-82FAR1 family protein