PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aradu.3ZC2Z | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | G2-like | ||||||||
Protein Properties | Length: 301aa MW: 34185.9 Da PI: 7.2954 | ||||||||
Description | G2-like family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | G2-like | 88.7 | 5.5e-28 | 19 | 69 | 2 | 55 |
G2-like 2 prlrWtpeLHerFveaveqLGGsekAtPktilelmkvkgLtlehvkSHLQkYRl 55 prlrWtpeLH++Fv+a+++LG +AtPk +l+lm+vkgLt++hvkSHLQ+YR+ Aradu.3ZC2Z 19 PRLRWTPELHRCFVHAIDSLG---EATPKLVLQLMDVKGLTISHVKSHLQMYRS 69 8*******************4...79***************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS51294 | 11.079 | 15 | 72 | IPR017930 | Myb domain |
Gene3D | G3DSA:1.10.10.60 | 2.6E-28 | 15 | 71 | IPR009057 | Homeodomain-like |
SuperFamily | SSF46689 | 5.2E-14 | 17 | 69 | IPR009057 | Homeodomain-like |
TIGRFAMs | TIGR01557 | 9.3E-21 | 19 | 69 | IPR006447 | Myb domain, plants |
Pfam | PF00249 | 4.1E-8 | 20 | 68 | IPR001005 | SANT/Myb domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0003677 | Molecular Function | DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 301 aa Download sequence Send to blast |
MATCGREGAV RQYIRSKVPR LRWTPELHRC FVHAIDSLGE ATPKLVLQLM DVKGLTISHV 60 KSHLQMYRSM RGDLGRQGRI SSSQHRNQSF EEHDDGCVEE VNDVNNNNNN HNQNYHPCSQ 120 SIGKESDSLF GYSNFSPKRA RIERNYSISQ NLQCRNQRTV PYPYSFYDYA YSTQQQQHQP 180 PHSTVFPMLP PLLGNFLQVT KLNDRETTSE PMTNNNNNNN NVLLNINKNN NTEKKARAEE 240 DEDEDVGREC ELSLSLTLPN PSPQRSSNVS SASEITEAAI SSSCSTTLKH RINLDLSLSL 300 C |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6j4k_A | 3e-17 | 20 | 71 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4k_B | 3e-17 | 20 | 71 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_A | 3e-17 | 20 | 71 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_B | 3e-17 | 20 | 71 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_C | 3e-17 | 20 | 71 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j4r_D | 3e-17 | 20 | 71 | 3 | 57 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_A | 3e-17 | 20 | 71 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_C | 3e-17 | 20 | 71 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_D | 3e-17 | 20 | 71 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_F | 3e-17 | 20 | 71 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_H | 3e-17 | 20 | 71 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
6j5b_J | 3e-17 | 20 | 71 | 4 | 58 | Protein PHOSPHATE STARVATION RESPONSE 1 |
Search in ModeBase |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Aradu.3ZC2Z |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | BT098225 | 2e-87 | BT098225.1 Soybean clone JCVI-FLGm-16F9 unknown mRNA. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_015942201.1 | 0.0 | putative Myb family transcription factor At1g14600 | ||||
TrEMBL | A0A445BEA1 | 0.0 | A0A445BEA1_ARAHY; Uncharacterized protein | ||||
STRING | GLYMA20G24290.1 | 1e-107 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF5539 | 33 | 53 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G14600.1 | 3e-31 | G2-like family protein |