PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.23Q7Y
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family FAR1
Protein Properties Length: 457aa    MW: 52205.4 Da    PI: 6.0059
Description FAR1 family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.23Q7YgenomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1FAR1621.7e-1999189290
         FAR1   2 fYneYAkevGFsvrkskskkskrngeitkrtfvCskegkreeekkk..tekerrtraetrtgCkaklkvkkek.dgkwevtkleleHnHela 90 
                  fY+ YA++  F vrk+k +++ rn+ +t+++fvC ++g+re  + +   +++r++++etr+gC+ +++v+ ++ +g+w  + ++  HnHel 
  Aradu.23Q7Y  99 FYSLYANMNSFAVRKNKIRRNVRNE-VTQQEFVCFRKGSREMGSVNngMRRKREPKVETRCGCETEMRVHVHSeSGRWITSYFQDVHNHELL 189
                  9*******************97776.***************99888677889999****************999****************96 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF031011.5E-1699189IPR004330FAR1 DNA binding domain
Sequence ? help Back to Top
Protein Sequence    Length: 457 aa     Download sequence    Send to blast
MEGESAADEC YRPLSAEEEG GDGSDAFGIG SDEFGDKVEN GKLGVESDAH ENFGDSFFDN  60
WEERAVDGIA ELGCINFKEI IAKEIMMCHF PDRLVAFLFY SLYANMNSFA VRKNKIRRNV  120
RNEVTQQEFV CFRKGSREMG SVNNGMRRKR EPKVETRCGC ETEMRVHVHS ESGRWITSYF  180
QDVHNHELLD DRLTFMLPGH RKMDAAALEQ MNMMLRVGIK MPQIYSSFVH TAGGFQNLPF  240
LKRDMEAHSD LLSVVWEPAL QSPFHGLERS TAKKLTRAIF FNFRHMLFRA CTWKVRTHTW  300
SQTCDTFTLL RSANARREWQ VCHYGDNNSF KCSCQMESLG IPCYQIVAVL AHLEMTDIPD  360
SLVLNRWSKS ACSKVRAFVE KGPFCYDSMI TCRNWMLNDL CREMCVLACC DEAEFADMTD  420
KVLHEIVRLK EIKDCGDAGG RNEGGEASTL EGCVRDP
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.23Q7Y
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_015969596.11e-180protein FAR1-RELATED SEQUENCE 5-like
TrEMBLA0A445CK010.0A0A445CK01_ARAHY; Uncharacterized protein
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF3613639
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G28530.12e-14FAR1-related sequence 10