PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
Home  TFext  BLAST  Prediction  Download  Help  About  Links  PlantRegMap
(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aradu.1VU63
Organism
Arachis duranensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
Family ERF
Protein Properties Length: 394aa    MW: 44749.3 Da    PI: 6.4271
Description ERF family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aradu.1VU63genomeNCGR_PGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1AP2461.3e-1446103155
          AP2   1 sgykGVrwdkkrgrWvAeIrdpseng....krkrfslgkfgtaeeAakaaiaarkkleg 55 
                  ++++GVr++  +g+WvAeI++p + +    k  r + g+f    eAa a+++a+k+l+g
  Aradu.1VU63  46 CKFRGVRQRI-WGKWVAEICEPINSKrvgeKANRLWFGTFSIVLEAALAYDEAAKNLYG 103
                  79*****998.**********86644566666*************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PfamPF008471.2E-1146103IPR001471AP2/ERF domain
CDDcd000181.82E-2346113No hitNo description
SuperFamilySSF541715.36E-1547112IPR016177DNA-binding domain
PROSITE profilePS5103219.25647111IPR001471AP2/ERF domain
SMARTSM003801.8E-2447117IPR001471AP2/ERF domain
Gene3DG3DSA:3.30.730.104.6E-2347112IPR001471AP2/ERF domain
PRINTSPR003679.2E-104859IPR001471AP2/ERF domain
PRINTSPR003679.2E-1093113IPR001471AP2/ERF domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 394 aa     Download sequence    Send to blast
MKTETILSFQ QLIRERDEVE VIHKIPAKGS RKGCMRGKSG PQNYDCKFRG VRQRIWGKWV  60
AEICEPINSK RVGEKANRLW FGTFSIVLEA ALAYDEAAKN LYGPGARLNF PHHYGIESVG  120
SNGSSTSTGF DQKSPSGTYV NILNGGDVAK VDWLKENLDM GLEEKFSQAN ELLEMECKRG  180
ILQEPFKYVK DDVAGGSGGL EGELEDVLRN SSIVEECNNY MLEDHMCMAM NIGADYNSCD  240
TIAQGMMGRV KWKIANLLSC RNHYFEYLHN MIPNSNPKYK QFNNLKSLFQ QKTWRNQYTF  300
GSIANVSENG DLNINNTNRD SKLQEKKNHE NSEFECISGQ SKRYSDTSQP LQNLGGYLPE  360
HLNNIQFADM ELGHDYSFLN PDYDFGLLKE KKVT
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
5wx9_A3e-13471181479Ethylene-responsive transcription factor ERF096
Search in ModeBase
Cis-element ? help Back to Top
SourceLink
PlantRegMapAradu.1VU63
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020978191.11e-158uncharacterized protein LOC107636903
TrEMBLA0A444ZK561e-140A0A444ZK56_ARAHY; Uncharacterized protein
STRINGGLYMA07G19221.12e-76(Glycine max)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
FabidsOGEF132862127
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G40340.15e-32ERF family protein