PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aradu.1S9TS | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; rosids; fabids; Fabales; Fabaceae; Papilionoideae; Dalbergieae; Arachis
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Family | WRKY | ||||||||
Protein Properties | Length: 211aa MW: 23876.6 Da PI: 8.0442 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 77.3 | 1.7e-24 | 128 | 188 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST...T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa...gCpvkkkversaedpkvveitYegeHnhe 59 dDg++WrKYGqK++ ++++pr+YYrCt++ gC ++k+v++ +++p++ ++tY g+H+++ Aradu.1S9TS 128 DDGHQWRKYGQKVILNTKHPRNYYRCTHKydqGCLATKQVQQVEDEPTLYKTTYYGNHTCR 188 8***************************99999**************************96 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:2.20.25.80 | 1.3E-26 | 113 | 188 | IPR003657 | WRKY domain |
PROSITE profile | PS50811 | 20.564 | 122 | 185 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 3.79E-25 | 125 | 188 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.5E-35 | 127 | 189 | IPR003657 | WRKY domain |
Pfam | PF03106 | 1.9E-24 | 128 | 188 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0009862 | Biological Process | systemic acquired resistance, salicylic acid mediated signaling pathway | ||||
GO:0009864 | Biological Process | induced systemic resistance, jasmonic acid mediated signaling pathway | ||||
GO:0010200 | Biological Process | response to chitin | ||||
GO:0045892 | Biological Process | negative regulation of transcription, DNA-templated | ||||
GO:0050832 | Biological Process | defense response to fungus | ||||
GO:1900056 | Biological Process | negative regulation of leaf senescence | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 211 aa Download sequence Send to blast |
MVITENISNG NNLLGRRKAI EELEKGREFA NKLRVVISGG EGGVDGEQLV EKVLMSFTNS 60 LLILNKNTGS NNCDEVYDVP SSCGINPTKS EDSLESNCKS SVHKERRGCY KRRRTSQVLE 120 KESEAPIDDG HQWRKYGQKV ILNTKHPRNY YRCTHKYDQG CLATKQVQQV EDEPTLYKTT 180 YYGNHTCRNN LNPTIILDES NDSPSQSSIK T |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
6ir8_A | 1e-24 | 127 | 188 | 8 | 69 | OsWRKY45 |
Search in ModeBase |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00408 | DAP | Transfer from AT3G56400 | Download |
Cis-element ? help Back to Top | |
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Source | Link |
PlantRegMap | Aradu.1S9TS |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_025695814.1 | 1e-154 | WRKY DNA-binding transcription factor 70 | ||||
TrEMBL | A0A445DEE9 | 1e-153 | A0A445DEE9_ARAHY; Uncharacterized protein | ||||
STRING | GLYMA18G44560.1 | 3e-77 | (Glycine max) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Fabids | OGEF1995 | 34 | 86 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G56400.1 | 2e-39 | WRKY DNA-binding protein 70 |