PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aco026741.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
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Family | WRKY | ||||||||
Protein Properties | Length: 402aa MW: 43503.4 Da PI: 5.1741 | ||||||||
Description | WRKY family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | WRKY | 98 | 6.2e-31 | 205 | 263 | 2 | 59 |
--SS-EEEEEEE--TT-SS-EEEEEE-ST.T---EEEEEE-SSSTTEEEEEEES--SS- CS WRKY 2 dDgynWrKYGqKevkgsefprsYYrCtsa.gCpvkkkversaedpkvveitYegeHnhe 59 +D ++WrKYGqK++kgs++pr+YYrC+s+ gC+++k+vers++dp++++itY++eHnh+ Aco026741.1 205 SDLWAWRKYGQKPIKGSPYPRGYYRCSSSkGCSARKQVERSRTDPNMLVITYTSEHNHP 263 699************************998****************************7 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
PROSITE profile | PS50811 | 32.81 | 199 | 265 | IPR003657 | WRKY domain |
Gene3D | G3DSA:2.20.25.80 | 9.5E-31 | 202 | 265 | IPR003657 | WRKY domain |
SuperFamily | SSF118290 | 2.88E-26 | 203 | 265 | IPR003657 | WRKY domain |
SMART | SM00774 | 1.4E-37 | 204 | 264 | IPR003657 | WRKY domain |
Pfam | PF03106 | 8.1E-26 | 206 | 263 | IPR003657 | WRKY domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0005634 | Cellular Component | nucleus | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 402 aa Download sequence Send to blast |
MCDSFWQRME ADQRGDLADI VRAGGLTTTP SPEFLLTSCG PMPSFRTSSS STDADRPMNN 60 FGDPFANLGD PLLNKSTGTG FFDVQETATA VETVGDLGQK FDLIGEKIDK QPCNIFSRVL 120 QISPAGPNAW GLSPTAIKPS PSMPGGMVKL GEGLVGGAAD SMAGMQISPP HSSGIKRRKN 180 QAKKVVCIPA PAAANGRPNG EVVPSDLWAW RKYGQKPIKG SPYPRGYYRC SSSKGCSARK 240 QVERSRTDPN MLVITYTSEH NHPWPTQRNA LAGSTRSQTT KSSYSGSNSS PRSQKQSQAL 300 KEATDSTSSS NINPPAKEEV VENEKPIDAA EYDEFDTISH RGYNPMISES SHSDDFFADL 360 AELEPDPMSL IFSKELSEAK PDEERGDNAM DPFDMFGWAR D* |
3D Structure ? help Back to Top | ||||||
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PDB ID | Evalue | Query Start | Query End | Hit Start | Hit End | Description |
5w3x_B | 2e-25 | 179 | 266 | 2 | 80 | Disease resistance protein RRS1 |
5w3x_D | 2e-25 | 179 | 266 | 2 | 80 | Disease resistance protein RRS1 |
Search in ModeBase |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00171 | DAP | Transfer from AT1G30650 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020095407.1 | 0.0 | probable WRKY transcription factor 14 | ||||
Refseq | XP_020095408.1 | 0.0 | probable WRKY transcription factor 14 | ||||
TrEMBL | A0A199UPJ5 | 0.0 | A0A199UPJ5_ANACO; Putative WRKY transcription factor 35 | ||||
STRING | XP_008788702.1 | 1e-159 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP2592 | 38 | 88 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT1G30650.1 | 3e-78 | WRKY DNA-binding protein 14 |
Link Out ? help Back to Top | |
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Phytozome | Aco026741.1 |