 |
Plant Transcription
Factor Database
|
Transcription Factor Information
|
Basic
Information? help
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| TF ID |
Aco014970.1 |
| Organism |
|
| Taxonomic ID |
|
| Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
|
| Family |
G2-like |
| Protein Properties |
Length: 395aa MW: 42387.2 Da PI: 12.1271 |
| Description |
G2-like family protein |
| Gene Model |
| Gene Model ID |
Type |
Source |
Coding Sequence |
| Aco014970.1 | genome | JGI | View CDS |
|
| Signature Domain? help Back to Top |
 |
| No. |
Domain |
Score |
E-value |
Start |
End |
HMM Start |
HMM End |
| 1 | G2-like | 44.5 | 3.4e-14 | 124 | 156 | 7 | 40 |
G2-like 7 tpeLHerFveaveqLGGsekAtPktilelmkvkg 40
tp+LH+rFv+av++L G+++A+Pkti++lm+v+g
Aco014970.1 124 TPQLHKRFVDAVAHL-GIKNAVPKTIMQLMSVDG 156
89*************.****************98 PP
|
| Sequence ? help Back to Top |
| Protein Sequence Length: 395 aa
Download sequence Send
to blast |
MREEEEPSWF ARWEEQLPRP DELTPLSQTL ITPDLALAFD IPTSSPSPSP TNPTSLHHDP 60
SAAAAAAAGA HSHATPHAHG LARRRRRRCD GAAGSDLNGA GGGGGGAGAG RSRRDAEAAA 120
AGGTPQLHKR FVDAVAHLGI KNAVPKTIMQ LMSVDGSPAR TRQPPPEVPP LPQAHAGPHL 180
LLLSPRAPPP PPPTASPPPP PRRRPRHDHL FATAPVPPLP RPPRLSSAAA AAPPAPIPSS 240
LPAGAATLQH HQQLTALHHH SHQQFYPHPH PHPTTTTTPA PAAASRPLRR LRAAPRQRRR 300
GVRARLLDRA VPLPNAPAPD GPPRPAPRSR RRRRPRRRTP MIWNPAPGPD PAEERAHPVP 360
LARIDLLVTR TMQRVDKLDV YSEPTKRMEE KSTI*
|
| Nucleic Localization
Signal ? help
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 |
| No. |
Start |
End |
Sequence |
| 1 | 82 | 87 | RRRRRR |
| 2 | 327 | 337 | RSRRRRRPRRR |
| 3 | 329 | 336 | RRRRRPRR |
| 4 | 332 | 337 | RRPRRR |
| Annotation --
Nucleotide ? help
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| Source |
Hit ID |
E-value |
Description |
| GenBank | HG670306 | 2e-66 | HG670306.1 Triticum aestivum chromosome 3B, genomic scaffold, cultivar Chinese Spring. |
| GenBank | KF769443 | 2e-66 | KF769443.1 Triticum aestivum cultivar Chinese Spring LUX-A gene, complete cds. |
| GenBank | KF769444 | 2e-66 | KF769444.1 Triticum aestivum cultivar Chinese Spring LUX-B gene, complete cds. |
