PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco003781.1
Organism
Ananas comosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family NAC
Protein Properties Length: 346aa    MW: 37630.9 Da    PI: 4.9327
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco003781.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM53.57.9e-1778254128
          NAM  54 eekewyfFskrdkkyat.gkrknr..atksgyWkatgkdkevlskkgelvglkktLvfykgrapkgektdWvmheyrl 128
                   e+ wy +  +d+++++ ++++n   +t++gyWk+   ++ + + + ++vg+k+tL fy+g+ p+g++t W+mhey++
  Aco003781.1   7 AENVWYLYKLEDQQSPNtENQENNikVTRTGYWKSMDAHR-IPT-SAQTVGTKTTLEFYEGQVPSGKRTGWLMHEYQA 82 
                  4678*******999996233333334799*****998865.554.5899***************************86 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
PROSITE profilePS5100524.171104IPR003441NAC domain
SuperFamilySSF1019411.57E-177104IPR003441NAC domain
PfamPF023658.3E-91181IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 346 aa     Download sequence    Send to blast
MSEASLAENV WYLYKLEDQQ SPNTENQENN IKVTRTGYWK SMDAHRIPTS AQTVGTKTTL  60
EFYEGQVPSG KRTGWLMHEY QADQKPQGLA AVQDYSSLCR VFRQIDQWPN NDGQNKSLSG  120
DADCDSLGRY LLSLPGQESN FSSQGPLNKS QIVAGDEPSV TNAGSLLNEP RSDHSAEEFN  180
AMFDISNGDY LEINDLLSPD SSSSSSGNSS NRSNKFDELF DADALLRDLV NGCNSQSLQE  240
ERTDYRFSRS TLVRSNQVVI RPPQPGSIQS QNSNVVVTAS VHGNSSDASS PTTSQASSST  300
KSHNSNVNRT PPEGSQGNRS PPGPGGSSFG RVAKLGKKYC CFVPF*
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020104035.10.0NAC domain-containing protein 13-like isoform X2
RefseqXP_020104036.10.0NAC domain-containing protein 13-like isoform X2
RefseqXP_020104037.10.0NAC domain-containing protein 13-like isoform X2
RefseqXP_020104038.10.0NAC domain-containing protein 13-like isoform X2
RefseqXP_020104039.10.0NAC domain-containing protein 13-like isoform X2
RefseqXP_020104040.10.0NAC domain-containing protein 13-like isoform X2
TrEMBLA0A199V2W60.0A0A199V2W6_ANACO; NAC domain-containing protein 74
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP109162632
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G03200.18e-17NAC domain containing protein 45