PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Aco001326.1
Organism
Ananas comosus
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
Family bZIP
Protein Properties Length: 445aa    MW: 45023.3 Da    PI: 8.4549
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Aco001326.1genomeJGIView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_143.95.1e-14371418552
                  CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
       bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleel 52 
                  +r+rr++kNRe+A rsR+RK+a++ eLe +v++L+++N++L+k+  e+
  Aco001326.1 371 RRQRRMIKNRESAARSRARKQAYTMELEAEVAKLKEQNQELQKKQAEM 418
                  79************************************9998875554 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.3E-9367425IPR004827Basic-leucine zipper domain
PROSITE profilePS5021711.346369421IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1704.9E-15371424No hitNo description
PfamPF001701.0E-11371419IPR004827Basic-leucine zipper domain
CDDcd147072.34E-26371418No hitNo description
SuperFamilySSF579598.75E-11371420No hitNo description
PROSITE patternPS000360374389IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0009414Biological Processresponse to water deprivation
GO:0009651Biological Processresponse to salt stress
GO:0009738Biological Processabscisic acid-activated signaling pathway
GO:0010255Biological Processglucose mediated signaling pathway
GO:0045893Biological Processpositive regulation of transcription, DNA-templated
GO:0005634Cellular Componentnucleus
GO:0000976Molecular Functiontranscription regulatory region sequence-specific DNA binding
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 445 aa     Download sequence    Send to blast
GAMMHPQQLG SDGDDGRPPA TPLPLARQGS VYSLTFDEFQ STLGGIGKDF GSMNMDELLK  60
NIWTAEESQA MASALGGGAA AAAAAAAAAA AAAGTIGSAG AAGGGVAGGG GGLQRQGSLT  120
LPRTLSQKTV DEVWRDLIRE GAPGPVAGGG GGGGGGAGAP DIQHQRQPTL GEMTLEEFLV  180
RAGVVREDMT QPRTLGGGSN NTSSNPPNSL FTSNNTPSSL FYGSLQSSND TGGLALGFAQ  240
TPRSNGHLVT HGITNNSAAN LPLTSPGARS YGASVPLGSN TDLGHVPGMR GGGMMGIGDS  300
VMNNGLMPGV VGLGGGGVTL AAAGSPASQI GSDGIGKGNG DLSSLSPVPY VFNGGLRGRK  360
CGGAVEKVME RRQRRMIKNR ESAARSRARK QAYTMELEAE VAKLKEQNQE LQKKQAEMEM  420
QKNQASWHAT TSLPLLFLQE AKSA*
Functional Description ? help Back to Top
Source Description
UniProtInvolved in ABA and stress responses and acts as a positive component of glucose signal transduction. Functions as transcriptional activator in the ABA-inducible expression of rd29B. Binds specifically to the ABA-responsive element (ABRE) of the rd29B gene promoter. {ECO:0000269|PubMed:11005831, ECO:0000269|PubMed:15361142, ECO:0000269|PubMed:16284313, ECO:0000269|PubMed:16463099}.
Binding Motif ? help Back to Top
Motif ID Method Source Motif file
MP00186DAPTransfer from AT1G45249Download
Motif logo
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Up-regulated by drought, salt, abscisic acid (ABA), cold and glucose. {ECO:0000269|PubMed:10636868, ECO:0000269|PubMed:11005831, ECO:0000269|PubMed:15361142, ECO:0000269|PubMed:16284313, ECO:0000269|PubMed:16463099}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieveRetrieve
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankJN8535903e-44JN853590.1 Sorghum bicolor genotype B35 ABA responsive element binding factor 1 (ABF1) gene, complete cds.
GenBankJN8535913e-44JN853591.1 Sorghum bicolor genotype CSV216R ABA responsive element binding factor 1 (ABF1) gene, complete cds.
GenBankJN8535923e-44JN853592.1 Sorghum bicolor genotype RS585 ABA responsive element binding factor 1 (ABF1) gene, complete cds.
GenBankKF7765153e-44KF776515.1 Sorghum bicolor genotype R16 ABA responsive element binding factor 1 (ABF1) gene, complete cds.
GenBankKF7765163e-44KF776516.1 Sorghum bicolor genotype M35 ABA responsive element binding factor 1 (ABF1) gene, complete cds.
GenBankKF7765173e-44KF776517.1 Sorghum bicolor genotype Halepense ABA responsive element binding factor 1 (ABF1) gene, complete cds.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_020080760.10.0bZIP transcription factor TRAB1-like
SwissprotQ9M7Q41e-100AI5L5_ARATH; ABSCISIC ACID-INSENSITIVE 5-like protein 5
TrEMBLA0A199UMQ40.0A0A199UMQ4_ANACO; ABSCISIC ACID-INSENSITIVE 5-like protein 5
STRINGXP_008797272.11e-146(Phoenix dactylifera)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP70638147
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT1G45249.12e-72abscisic acid responsive elements-binding factor 2
Publications ? help Back to Top
  1. Gao S, et al.
    ABF2, ABF3, and ABF4 Promote ABA-Mediated Chlorophyll Degradation and Leaf Senescence by Transcriptional Activation of Chlorophyll Catabolic Genes and Senescence-Associated Genes in Arabidopsis.
    Mol Plant, 2016. 9(9): p. 1272-1285
    [PMID:27373216]
  2. Seok HY, et al.
    Arabidopsis AtNAP functions as a negative regulator via repression of AREB1 in salt stress response.
    Planta, 2017. 245(2): p. 329-341
    [PMID:27770200]