PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Aco000921.1 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Bromeliaceae; Ananas
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Family | bZIP | ||||||||
Protein Properties | Length: 190aa MW: 21945.5 Da PI: 8.7826 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 40.6 | 5.6e-13 | 94 | 147 | 3 | 56 |
XXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 3 elkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkkev 56 e +r rr+++NRe+ArrsR RK++ + eL v L + N++L +el++ + Aco000921.1 94 EERRRRRMISNRESARRSRMRKQKHLSELWAQVVHLRSANRQLLDELNRAMRGC 147 66899******************************************9977666 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 5.1E-11 | 90 | 147 | No hit | No description |
SMART | SM00338 | 2.6E-15 | 92 | 156 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 2.5E-10 | 94 | 144 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 10.496 | 94 | 157 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 8.75E-12 | 96 | 144 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 99 | 114 | IPR004827 | Basic-leucine zipper domain |
CDD | cd14702 | 1.92E-15 | 101 | 148 | No hit | No description |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 190 aa Download sequence Send to blast |
MHPTGEVASI RYLSPSNTPT FKSSHYDAAQ NNMSSFHFGN IFGPCVNQNI HIMQPNHEFS 60 DLHSPPACSV STVSCLRSGS TSDEADDRHR SSEEERRRRR MISNRESARR SRMRKQKHLS 120 ELWAQVVHLR SANRQLLDEL NRAMRGCDRI MHENARLREE RSELQKMVQK LQEEKNLSAQ 180 ENIEETNCK* |
Nucleic Localization Signal ? help Back to Top | |||
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No. | Start | End | Sequence |
1 | 95 | 116 | RRRRRMISNRESARRSRMRKQK |
2 | 108 | 115 | RRSRMRKQ |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Probable transcription factor involved in somatic embryogenesis. Acts as positive regulator of BHLH109. {ECO:0000269|PubMed:26973252}. |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | - |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_020083145.1 | 1e-139 | basic leucine zipper 8-like | ||||
Swissprot | Q9FMC2 | 6e-25 | BZP43_ARATH; Basic leucine zipper 43 | ||||
TrEMBL | A0A2H3YW69 | 5e-58 | A0A2H3YW69_PHODC; basic leucine zipper 43-like | ||||
STRING | XP_008804405.1 | 9e-59 | (Phoenix dactylifera) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Monocots | OGMP1186 | 35 | 126 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT3G30530.1 | 7e-17 | basic leucine-zipper 42 |
Link Out ? help Back to Top | |
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Phytozome | Aco000921.1 |
Publications ? help Back to Top | |||
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