PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn341031
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family NAC
Protein Properties Length: 287aa    MW: 33615.7 Da    PI: 9.4197
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn341031genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM154.93.5e-48111382128
         NAM   2 ppGfrFhPtdeelvveyLkkkvegkkleleevikevdiykvePwdLpkkvkaeekewyfFskrdkkyatgkrknratksgyWkatgkdkevlsk..kge 98 
                  pGfrFhPt+eel+++yLk+ + gk++ + ++i  ++iy+++P+dLp+ +k +e+ewyfF++rd+k+ +g r+nr+tk+g+Wkatg+d+++ls+   ++
  Achn341031  11 LPGFRFHPTEEELIHFYLKNMIFGKRMCF-DIIGVLNIYHHDPRDLPRLAKIGEREWYFFVPRDRKHGNGGRPNRTTKTGFWKATGSDRKILSStdPKK 108
                 59************************988.99***************8888899***************************************977677 PP

         NAM  99 lvglkktLvfykgrapkgektdWvmheyrl 128
                  +glkktLvfykgrap+g ktdWvm+eyrl
  Achn341031 109 MIGLKKTLVFYKGRAPRGCKTDWVMNEYRL 138
                 8***************************98 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019412.62E-565156IPR003441NAC domain
PROSITE profilePS5100552.88710156IPR003441NAC domain
PfamPF023651.7E-2512138IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 287 aa     Download sequence    Send to blast
MEESASEVDQ LPGFRFHPTE EELIHFYLKN MIFGKRMCFD IIGVLNIYHH DPRDLPRLAK  60
IGEREWYFFV PRDRKHGNGG RPNRTTKTGF WKATGSDRKI LSSTDPKKMI GLKKTLVFYK  120
GRAPRGCKTD WVMNEYRLPE TCPSPKDMVL CKIYRKATSK KVLEQRAAME EEMKTFHQLK  180
PSPPMTSPMD TISFSSSQHE DYFRAPMASH YGMAFKKEDE FGDENRFIVE DQKREVASLH  240
LPLRKEKLPE LQVPRLSMDW TQDPFWTQLR SPWLDNLTPY ANVLNF*
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A3e-4631568168Stress-induced transcription factor NAC1
Search in ModeBase
Functional Description ? help Back to Top
Source Description
UniProtTranscription activator that binds sequence-specific DNA motifs. Involved in stress response. Plays a positive role in drought and salt stress tolerance through the modulation of abscisic acid-mediated signaling. {ECO:0000269|PubMed:26834774}.
Regulation -- Description ? help Back to Top
Source Description
UniProtINDUCTION: Induced by drought stress, salt stress and abscisic acid (ABA). {ECO:0000269|PubMed:26834774}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028061344.11e-143NAC domain-containing protein 22-like
SwissprotQ10S653e-98NAC22_ORYSJ; NAC domain-containing protein 22
TrEMBLA0A2R6RNH50.0A0A2R6RNH5_ACTCH; NAC domain-containing protein
STRINGGorai.005G257800.11e-128(Gossypium raimondii)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA35312248
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17040.11e-107NAC domain containing protein 36
Publications ? help Back to Top
  1. Hong Y,Zhang H,Huang L,Li D,Song F
    Overexpression of a Stress-Responsive NAC Transcription Factor Gene ONAC022 Improves Drought and Salt Tolerance in Rice.
    Front Plant Sci, 2016. 7: p. 4
    [PMID:26834774]