PlantTFDB - Plant Transcription Factor Database @ CBI, PKU

PlantRegMap/PlantTFDB v5.0

Plant Transcription Factor Database

Transcription Factor Information

Basic Information | Signature Domain | Sequence |

Basic Information? help Back to Top

TF ID

Achn299091

Organism

Actinidia chinensis

Taxonomic ID

3625

Taxonomic Lineage

cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia

Family

bHLH

Protein Properties

Length: 290aa MW: 31800 Da PI: 7.1007

Description

bHLH family protein

Gene Model

Gene Model ID	Type	Source	Coding Sequence
Achn299091	genome	IKGC	View CDS

Signature Domain? help Back to Top

No.	Domain	Score	E-value	Start	End	HMM Start	HMM End
1	HLH	19.5	1.8e-06	215	242	3	30
HHHHHHHHHHHHHHHHHHHHHHCTSCCC CS HLH 3 rahnerErrRRdriNsafeeLrellPka 30 +h+ +Er RR+ri +++ L+el+P + Achn299091 215 NSHSLAERVRRERISERMRLLQELVPGC 242 58************************86 PP

Protein Features ? help Back to Top

Database	Entry ID	E-value	Start	End	InterPro ID	Description
SuperFamily	SSF47459	7.72E-8	210	246	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
CDD	cd00083	4.87E-5	210	246	No hit	No description
PROSITE profile	PS50888	10.461	212	267	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain
Gene3D	G3DSA:4.10.280.10	4.8E-7	215	244	IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain

Gene Ontology ? help Back to Top
GO Term	GO Category	GO Description
GO:0046983	Molecular Function	protein dimerization activity

Sequence ? help Back to Top
Protein Sequence Length: 290 aa Download sequence Send to blast
MGSEDTANMR SSTGGENFFG SGWDPIASMN QSESFGSEFG NSPYSSVILG NQTIPSSSHL 60 VHYPSDSSHG LVEMVPKFPF FGSDSFSEMV GSFALPDCAQ IAPTEKTSTA DDQQVSEEGK 120 MGISPCGNRK KRSSESNSPF NPSKNSEGKN QREISGDSSE YTKEQDEKKQ KIELNVGANL 180 RGKQTGKQGK DNSNSGEAPK ENYIHMRAKR GQATNSHSLA ERVRRERISE RMRLLQELVP 240 GCNKCSYSRI CSRDELSSLP TGYPTRILAQ YTEYVYVSFH ASGRSKLEL*

Regulation -- PlantRegMap ? help Back to Top
Source	Upstream Regulator	Target Gene
PlantRegMap	Retrieve	-

Annotation -- Protein ? help Back to Top
Source	Hit ID	E-value	Description
Refseq	XP_028059275.1	2e-98	transcription factor bHLH74-like isoform X3
TrEMBL	A0A2R6Q0J6	1e-177	A0A2R6Q0J6_ACTCH; Transcription factor bHLH74 like
STRING	EMJ23373	2e-95	(Prunus persica)

Orthologous Group ? help Back to Top
Lineage	Orthologous Group ID	Taxa Number	Gene Number
Asterids	OGEA5250	24	35

Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID	E-value	Description
AT1G10120.1	9e-25	bHLH family protein