PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn159901
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family bZIP
Protein Properties Length: 222aa    MW: 24447.6 Da    PI: 9.541
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn159901genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_140.65.7e-13122165144
                 XXXXCHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   1 ekelkrerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNka 44 
                 +ke kr +r+ +NR++A+  R+RKka++ eLe +vk Le++N +
  Achn159901 122 DKENKRLKRLLRNRVSAQQARERKKAYLTELEARVKDLEKKNAE 165
                 5899**************************************75 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.7E-7122183IPR004827Basic-leucine zipper domain
PfamPF001706.2E-11123165IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.231124166IPR004827Basic-leucine zipper domain
SuperFamilySSF579593.25E-10126167No hitNo description
Gene3DG3DSA:1.20.5.1706.5E-13126166No hitNo description
CDDcd147043.05E-16127170No hitNo description
PROSITE patternPS000360129144IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 222 aa     Download sequence    Send to blast
MVDPMEPLRF SPAVRQLRSR ICTLRKRSDP DSMLCEGKMQ EQATSSVAAS SLPSSSERSS  60
SSALQLEAKE GMESDDEIRR VPEIGAEATG VASAREASSA AGPNRVQASS DGPRKRGRSP  120
ADKENKRLKR LLRNRVSAQQ ARERKKAYLT ELEARVKDLE KKNAEFLAVV ISEFFFTTAK  180
NSDVSIIGGS DCENTSIFTD LIRVFLGFYY GLARNNVFDF V*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
1112118PRKRGRS
Functional Description ? help Back to Top
Source Description
UniProtTranscription factor that promotes photomorphogenesis in the light and positively regulates fruit pigmentation and fruit nutritional quality. Probably acts downstream of the light receptor network and directly affects transcription of light-induced genes. {ECO:0000269|PubMed:15178762}.
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_028120847.16e-57transcription factor HY5
SwissprotQ9SM507e-50HY5_SOLLC; Transcription factor HY5
TrEMBLA0A2R6Q2M79e-80A0A2R6Q2M7_ACTCH; Transcription factor like
STRINGXP_002515537.13e-54(Ricinus communis)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA80372430
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT5G11260.15e-33bZIP family protein
Publications ? help Back to Top
  1. Wang F, et al.
    Light Signaling-Dependent Regulation of Photoinhibition and Photoprotection in Tomato.
    Plant Physiol., 2018. 176(2): p. 1311-1326
    [PMID:29146776]
  2. Liu CC, et al.
    The bZip transcription factor HY5 mediates CRY1a-induced anthocyanin biosynthesis in tomato.
    Plant Cell Environ., 2018. 41(8): p. 1762-1775
    [PMID:29566255]