PlantRegMap/PlantTFDB v5.0
Plant Transcription
Factor Database
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Transcription Factor Information
Basic Information? help Back to Top | |||||||||
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TF ID | Achn126871 | ||||||||
Organism | |||||||||
Taxonomic ID | |||||||||
Taxonomic Lineage |
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
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Family | bZIP | ||||||||
Protein Properties | Length: 428aa MW: 48269.1 Da PI: 8.3739 | ||||||||
Description | bZIP family protein | ||||||||
Gene Model |
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Signature Domain? help Back to Top | |||||||
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No. | Domain | Score | E-value | Start | End | HMM Start | HMM End |
1 | bZIP_1 | 34.5 | 4.3e-11 | 136 | 176 | 5 | 45 |
CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS bZIP_1 5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaL 45 k rr+++NReAAr+sR+RKka++++Le +L++ ++L Achn126871 136 KTLRRLAQNREAARKSRLRKKAYVQQLESSRIKLTQLEQEL 176 7789************************8766666655544 PP |
Protein Features ? help Back to Top | ||||||
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Database | Entry ID | E-value | Start | End | InterPro ID | Description |
Gene3D | G3DSA:1.20.5.170 | 1.2E-8 | 129 | 178 | No hit | No description |
SMART | SM00338 | 2.3E-7 | 132 | 218 | IPR004827 | Basic-leucine zipper domain |
PROSITE profile | PS50217 | 9.289 | 134 | 178 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF00170 | 2.8E-8 | 136 | 176 | IPR004827 | Basic-leucine zipper domain |
SuperFamily | SSF57959 | 3.44E-7 | 136 | 178 | No hit | No description |
CDD | cd14708 | 1.77E-20 | 136 | 180 | No hit | No description |
PROSITE pattern | PS00036 | 0 | 139 | 154 | IPR004827 | Basic-leucine zipper domain |
Pfam | PF14144 | 1.7E-30 | 227 | 301 | IPR025422 | Transcription factor TGA like domain |
Gene Ontology ? help Back to Top | ||||||
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GO Term | GO Category | GO Description | ||||
GO:0006355 | Biological Process | regulation of transcription, DNA-templated | ||||
GO:0003700 | Molecular Function | transcription factor activity, sequence-specific DNA binding | ||||
GO:0043565 | Molecular Function | sequence-specific DNA binding |
Sequence ? help Back to Top |
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Protein Sequence Length: 428 aa Download sequence Send to blast |
MFILFRFFFL WVCSKDPGAY DLGELDQALF LYFDGQDHPS AHVQDQRQNS GMRPPTLNIF 60 PSQPMHIEPL PTKTSVGLVS SSNSGYKRPP EPSMESSKPK KDGLDQAPHK AIKREGHRKG 120 PTSSSEQEGP KTPDPKTLRR LAQNREAARK SRLRKKAYVQ QLESSRIKLT QLEQELQRAR 180 SQGVFFGGGG GLLGGDQGIP MINNISSDAA VFDMEYSRWV DEHHRLMCEL RLAVQEHIPE 240 NELRLFVDKC LAHYDELMNL KSMVAKSDVF HLISGIWKSA AERCFLWIGG LRPSDLIKII 300 ANQIEPLTEQ QLLGICGMQQ STQEAEEALS QGLEALNQSL SDTIASDSLS YPPNMGNYMG 360 QMAIAMNKLS TLEGFVRQAD NLRHQTIHRL HQILTTRQAA RCFLAMAEYF HRLRALSSLW 420 LARPRQE* |
Functional Description ? help Back to Top | ||||||
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Source | Description | |||||
UniProt | Transcription activator that binds to as1-like elements (5'-TGACGTAAgggaTGACGCA-3') in promoters of target genes. Regulates transcription in response to plant signaling molecules salicylic acid (SA), methyl jasmonate (MJ) and auxin (2,4D) only in leaves. Prevents lateral branching and may repress defense signaling. {ECO:0000269|PubMed:12777042}. |
Binding Motif ? help Back to Top | |||
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Motif ID | Method | Source | Motif file |
MP00491 | DAP | Transfer from AT5G06839 | Download |
Regulation -- PlantRegMap ? help Back to Top | ||||||
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Source | Upstream Regulator | Target Gene | ||||
PlantRegMap | Retrieve | Retrieve |
Annotation -- Nucleotide ? help Back to Top | ||||||
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Source | Hit ID | E-value | Description | |||
GenBank | AY998018 | 2e-51 | AY998018.1 Nicotiana tabacum TGA10 transcription factor mRNA, complete cds. |
Annotation -- Protein ? help Back to Top | |||||||
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Source | Hit ID | E-value | Description | ||||
Refseq | XP_028108904.1 | 0.0 | bZIP transcription factor TGA10 | ||||
Swissprot | Q52MZ2 | 0.0 | TGA10_TOBAC; bZIP transcription factor TGA10 | ||||
TrEMBL | A0A2R6QV67 | 0.0 | A0A2R6QV67_ACTCH; Transcription factor like | ||||
STRING | XP_010111398.1 | 0.0 | (Morus notabilis) |
Orthologous Group ? help Back to Top | |||
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Lineage | Orthologous Group ID | Taxa Number | Gene Number |
Asterids | OGEA2279 | 21 | 45 |
Best hit in Arabidopsis thaliana ? help Back to Top | ||||||
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Hit ID | E-value | Description | ||||
AT5G06839.3 | 1e-169 | bZIP family protein |