PlantTFDB
PlantRegMap/PlantTFDB v5.0
Plant Transcription Factor Database
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(e.g., LFY)
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID Achn057151
Organism
Actinidia chinensis
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; eudicotyledons; Gunneridae; Pentapetalae; asterids; Ericales; Actinidiaceae; Actinidia
Family bZIP
Protein Properties Length: 136aa    MW: 16088.2 Da    PI: 9.2646
Description bZIP family protein
Gene Model
Gene Model ID Type Source Coding Sequence
Achn057151genomeIKGCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1bZIP_145.91.2e-1455104554
                 CHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH CS
      bZIP_1   5 krerrkqkNReAArrsRqRKkaeieeLeekvkeLeaeNkaLkkeleelkk 54 
                 ++ rr+++NRe+ArrsR RK++ ++eL   v  L++eN++L ++l++ ++
  Achn057151  55 RKRRRMISNRESARRSRMRKQKHLDELWSQVMWLQNENHQLLDKLNRASE 104
                 5789**************************************99998766 PP
Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SMARTSM003381.1E-1451115IPR004827Basic-leucine zipper domain
PROSITE profilePS5021710.89853116IPR004827Basic-leucine zipper domain
Gene3DG3DSA:1.20.5.1701.2E-1153104No hitNo description
SuperFamilySSF579592.19E-1355104No hitNo description
PfamPF001701.7E-1255104IPR004827Basic-leucine zipper domain
CDDcd147025.22E-1756107No hitNo description
PROSITE patternPS0003605873IPR004827Basic-leucine zipper domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003700Molecular Functiontranscription factor activity, sequence-specific DNA binding
GO:0043565Molecular Functionsequence-specific DNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 136 aa     Download sequence    Send to blast
MTIHNVRIAK MSPWIHQKLL QGNEFQEFSP QPTCFSSYST SDEAVEQQLS LINERKRRRM  60
ISNRESARRS RMRKQKHLDE LWSQVMWLQN ENHQLLDKLN RASESHDRVV QENSQLKEEA  120
SELRLVITDM QLNSP*
Nucleic Localization Signal ? help Back to Top
NLS
No. Start End Sequence
15458RKRRR
25475RKRRRMISNRESARRSRMRKQK
36774RRSRMRKQ
Functional Description ? help Back to Top
Source Description
UniProtProbable transcription factor involved in somatic embryogenesis. Acts as positive regulator of BHLH109. {ECO:0000269|PubMed:26973252}.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_010694542.14e-60PREDICTED: basic leucine zipper 43
SwissprotQ9FMC23e-37BZP43_ARATH; Basic leucine zipper 43
TrEMBLA0A2R6RUD56e-72A0A2R6RUD5_ACTCH; Basic leucine zipper like
STRINGXP_010694542.12e-59(Beta vulgaris)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
AsteridsOGEA9472492
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT3G30530.13e-49basic leucine-zipper 42
Publications ? help Back to Top
  1. Nowak K,Gaj MD
    Stress-related function of bHLH109 in somatic embryo induction in Arabidopsis.
    J. Plant Physiol., 2016. 193: p. 119-26
    [PMID:26973252]
  2. Ezer D, et al.
    The G-Box Transcriptional Regulatory Code in Arabidopsis.
    Plant Physiol., 2017. 175(2): p. 628-640
    [PMID:28864470]